Gene Spro_3645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3645 
Symbol 
ID5606117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4032062 
End bp4033090 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content61% 
IMG OID640939196 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_001479869 
Protein GI157371880 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTG CCGTGCAATT TATCGATGTT TCGCGGAGCT TCGGCGAGGT TCGCGCCGTG 
GATCGGGTTT CTATCGAGAT ACAGGACGGG GAATTTTTCT CCATGCTCGG GCCTTCCGGC
TCGGGCAAAA CCACCTGCCT GCGACTGATC GCCGGCTTTG AACAGCTCAG CGCCGGTTCG
ATCCGCATTC ACGGGCAGGA GGCGGCCAAC CTGCCGCCGT ACCAGCGCGA CGTGAATACC
GTATTCCAGG ATTACGCCCT GTTCCCGCAC ATGTCGGTAC TGGAAAACGT CGCCTATGGA
TTGATGGTGA AGGGCGTCGC CAAACGTGAA CGGCTGGCAC GGGCACAGGA AGCGCTGGAC
AGCGTGGCGC TGGGTTTCGT GGCCGAGCGT AAGCCGGCGC ATCTTTCCGG TGGCCAGCGC
CAACGGGTCG CACTGGCCCG CGCGTTGGTG AACCGACCGC GGGTGCTGTT GCTGGACGAG
CCGCTGGGCG CGCTGGATCT CAAGCTGCGT GAACAGATGC AGGGCGAACT GAAAAAGCTG
CAGCGCCAAC TGGGGATCAC CTTTATTTTC GTCACCCACG ATCAGAGCGA AGCGCTGTCG
ATGTCTGACC GGGTGGCGGT GTTCAACAAT GGGCGTATCG AGCAGGTCGA CGCGCCGCGT
GAATTGTACA TGCGGCCGAA GACGCCGTTT GTTGCCGAGT TTGTCGGCAC CTCTAACGTG
GTGCGCAGCG AACTGGCTCA GCGTTTACTC GGCCAGACCG CCACTTTCTC GATCCGCCCC
GAGCATATTC GCTTAATGGA TCAGGCTGGT GCCGCGCAGG GTGAAATCCA GGTGCAGGGA
TTGCTGCAAG AGATCCATTA TCAGGGGGCG GCCACGCGCT ACGAAATTGC GTTGAGCAGC
GGTGAGAAAC TGCTGGTCAG CGAGGCGAAT CCTCAGTGGC ATGCCGCCGG ACAGCAGCAT
CTGATCGGTC AGCCGGTCAC CGCCTGCTGG TCACGTGAGG CGATGGTGCC ACTGCTGGAG
GAGAGGTGA
 
Protein sequence
MTIAVQFIDV SRSFGEVRAV DRVSIEIQDG EFFSMLGPSG SGKTTCLRLI AGFEQLSAGS 
IRIHGQEAAN LPPYQRDVNT VFQDYALFPH MSVLENVAYG LMVKGVAKRE RLARAQEALD
SVALGFVAER KPAHLSGGQR QRVALARALV NRPRVLLLDE PLGALDLKLR EQMQGELKKL
QRQLGITFIF VTHDQSEALS MSDRVAVFNN GRIEQVDAPR ELYMRPKTPF VAEFVGTSNV
VRSELAQRLL GQTATFSIRP EHIRLMDQAG AAQGEIQVQG LLQEIHYQGA ATRYEIALSS
GEKLLVSEAN PQWHAAGQQH LIGQPVTACW SREAMVPLLE ER