Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3609 |
Symbol | ispG |
ID | 5605859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 3988342 |
End bp | 3989463 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640939160 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_001479833 |
Protein GI | 157371844 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.409385 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAACC AATCGCCCAT CATCCGTCGA AAATCAACGC GAATTTACGT CGGCAATGTG CCTATTGGTG ATGGTGCGCC GATTGCCGTG CAGTCGATGA CTAACACCCG TACCACTGAT GTTGAAGCAA CGGTTAATCA GATCAAAGCG CTGGAGCGCG TGGGCGTTGA TATCGTCCGC GTTTCAGTCC CCACCATGGA TGCCGCCGAG GCGTTCAAAC TGATCAAGCA GCAGGTTAAC GTGCCGCTGG TCGCCGATAT CCACTTCGAT TACCGTATCG CGCTTCAGGT TGCCGAGTAT GGCGTAGACT GCCTGCGTAT CAATCCGGGC AATATCGGTA ACGAGTCGCG TATCCGTTCA GTCGTAGACT GCGCGCGCGA TAAAAACATC CCAATCCGTA TCGGGGTGAA TGGTGGTTCG CTGGAAAAAG ACATCCAGGA AAAATACGGC GAGCCTACGC CGGAAGCGCT ACTCGAATCC GCCATGCGCC ACGTTGATAT CCTTGACCGT CTCAACTTCG ACCAGTTCAA AGTGAGCGTC AAGGCATCCG ATGTGTTCCT GGCGGTGCAA TCCTATCGTC TGTTGGCTGC ACGTATCGAT CAGCCGTTGC ATCTGGGCAT CACCGAAGCC GGTGGCGCAC GCAGTGGCTC AGTGAAGTCG GCGATTGGTT TGGGGCTGCT GCTGTCGGAA GGCATCGGCG ATACTCTGCG TATCTCATTG GCAGCCGATC CGGTGGAAGA AGTTAAGGTC GGTTTCGACA TTCTGAAATC GCTGCGCATC CGCGCCCGCG GCATTAACTT TATCGCGTGC CCGACCTGTT CACGTCAGGA ATTTGACGTT ATCGGAACGG TCAACGCATT GGAACAGCGT CTGGAAGACA TCATCACGCC GATGGACATT TCGATTATCG GCTGTGTGGT CAATGGCCCG GGCGAAGCGT TGGTTTCCAC GCTGGGCGTT ACCGGTGGCC ATAAAAAGAG CGGTTTCTAC GAAGACGGTG TGCGCCAGAA AGAACGTTTC GACAACGAGC AGATGATTGA CCAGCTGGAA GCCAAAATTC GCGCCAAGGC GTCGATGATG GATGAAAGCA ATCGCATCGC GGTCAACCTG CTGGAAAAAT AA
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Protein sequence | MHNQSPIIRR KSTRIYVGNV PIGDGAPIAV QSMTNTRTTD VEATVNQIKA LERVGVDIVR VSVPTMDAAE AFKLIKQQVN VPLVADIHFD YRIALQVAEY GVDCLRINPG NIGNESRIRS VVDCARDKNI PIRIGVNGGS LEKDIQEKYG EPTPEALLES AMRHVDILDR LNFDQFKVSV KASDVFLAVQ SYRLLAARID QPLHLGITEA GGARSGSVKS AIGLGLLLSE GIGDTLRISL AADPVEEVKV GFDILKSLRI RARGINFIAC PTCSRQEFDV IGTVNALEQR LEDIITPMDI SIIGCVVNGP GEALVSTLGV TGGHKKSGFY EDGVRQKERF DNEQMIDQLE AKIRAKASMM DESNRIAVNL LEK
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