Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3604 |
Symbol | |
ID | 5605854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 3982428 |
End bp | 3983384 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640939155 |
Product | auxin efflux carrier |
Protein accession | YP_001479828 |
Protein GI | 157371839 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.610122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.279857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTGGG AAACCTGGAG TTTTGCATTC AACGTCACCG TACCCAATCT GTTAATGATG TTGCTGGGCA TATTGCTGCG CCACTGGCGC TTGATGGACG ACCGTTTTAT CGATGGCGCC ACCAAGCTGG TGTTTAACCT GGCGCTGCCC TGTTTATTGT TCTTCAGCAT CGCTACCAAC CACCCGCAGT TGCTGGGCAA CCTGCCGCTG GTAATCTTTG GCGCTATTGG CACCGTGGTC ACCTTCCTGC TGCTGGAAGT GGCGGCTATC TGGCTGGTTA AAGAGCCACG TGAGCGCGGT GTCTTTGTGC AGGGGGGCTT CCGGGCCAAT ACCGCCATTG TCGGCCTGGC CTATGCCATG ACCGCTTACG GCAGTGAGGG CGTGGCGTTA GGGTCGCTGT ACCTGACGGT GACGGTGATC CTGTTTAACA TACTGTCAGT GATTACCCTC ACGCGCAGCC TGCAGGGCGG GCAGGGCAAG CGGATCAGCC GTTTGTCGCT GTTGCGCAGT ATTGTCACCA ATCCGCTGAT TATCGGCCTG GTGTGCGGAC TGGCTTATGC CCAGACCGGT CTGGGAATAC CTCAGGTGAT CCGGCAGACC GGCAGCTATA TCTCCGCATT GTCGTTGCCG CTGGCCTTGC TGTGCACCGG CGCCAGTTTA GACCTGCGCG CCATGTTTCG TTCGTCCAAC GTGGCGGCGC TGTCCTCTTC GGCCAAGCTG TTTGTCGTGC CAGTGATAAT GACGCTGAGT GGCTGGCTGT GCGGTTTTCA CGGCGCGGCG TTGGGGATTA TTTTCCTGTT CTCGGCCACG CCAACGGCTT CTGGCAGCTA TGTGATGACG CGTGCGATGG GGGGGAACGC CACGCTGGCG GCGAATATTA TCGCCATCAC CACCGTCGGC TCGTTTTTCA CTACCGCGTT GGGCATCTAT TTCTTACGCT CATGGGGCGT GATTTAA
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Protein sequence | MSWETWSFAF NVTVPNLLMM LLGILLRHWR LMDDRFIDGA TKLVFNLALP CLLFFSIATN HPQLLGNLPL VIFGAIGTVV TFLLLEVAAI WLVKEPRERG VFVQGGFRAN TAIVGLAYAM TAYGSEGVAL GSLYLTVTVI LFNILSVITL TRSLQGGQGK RISRLSLLRS IVTNPLIIGL VCGLAYAQTG LGIPQVIRQT GSYISALSLP LALLCTGASL DLRAMFRSSN VAALSSSAKL FVVPVIMTLS GWLCGFHGAA LGIIFLFSAT PTASGSYVMT RAMGGNATLA ANIIAITTVG SFFTTALGIY FLRSWGVI
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