Gene Spro_3604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3604 
Symbol 
ID5605854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3982428 
End bp3983384 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content58% 
IMG OID640939155 
Productauxin efflux carrier 
Protein accessionYP_001479828 
Protein GI157371839 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.610122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.279857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTGGG AAACCTGGAG TTTTGCATTC AACGTCACCG TACCCAATCT GTTAATGATG 
TTGCTGGGCA TATTGCTGCG CCACTGGCGC TTGATGGACG ACCGTTTTAT CGATGGCGCC
ACCAAGCTGG TGTTTAACCT GGCGCTGCCC TGTTTATTGT TCTTCAGCAT CGCTACCAAC
CACCCGCAGT TGCTGGGCAA CCTGCCGCTG GTAATCTTTG GCGCTATTGG CACCGTGGTC
ACCTTCCTGC TGCTGGAAGT GGCGGCTATC TGGCTGGTTA AAGAGCCACG TGAGCGCGGT
GTCTTTGTGC AGGGGGGCTT CCGGGCCAAT ACCGCCATTG TCGGCCTGGC CTATGCCATG
ACCGCTTACG GCAGTGAGGG CGTGGCGTTA GGGTCGCTGT ACCTGACGGT GACGGTGATC
CTGTTTAACA TACTGTCAGT GATTACCCTC ACGCGCAGCC TGCAGGGCGG GCAGGGCAAG
CGGATCAGCC GTTTGTCGCT GTTGCGCAGT ATTGTCACCA ATCCGCTGAT TATCGGCCTG
GTGTGCGGAC TGGCTTATGC CCAGACCGGT CTGGGAATAC CTCAGGTGAT CCGGCAGACC
GGCAGCTATA TCTCCGCATT GTCGTTGCCG CTGGCCTTGC TGTGCACCGG CGCCAGTTTA
GACCTGCGCG CCATGTTTCG TTCGTCCAAC GTGGCGGCGC TGTCCTCTTC GGCCAAGCTG
TTTGTCGTGC CAGTGATAAT GACGCTGAGT GGCTGGCTGT GCGGTTTTCA CGGCGCGGCG
TTGGGGATTA TTTTCCTGTT CTCGGCCACG CCAACGGCTT CTGGCAGCTA TGTGATGACG
CGTGCGATGG GGGGGAACGC CACGCTGGCG GCGAATATTA TCGCCATCAC CACCGTCGGC
TCGTTTTTCA CTACCGCGTT GGGCATCTAT TTCTTACGCT CATGGGGCGT GATTTAA
 
Protein sequence
MSWETWSFAF NVTVPNLLMM LLGILLRHWR LMDDRFIDGA TKLVFNLALP CLLFFSIATN 
HPQLLGNLPL VIFGAIGTVV TFLLLEVAAI WLVKEPRERG VFVQGGFRAN TAIVGLAYAM
TAYGSEGVAL GSLYLTVTVI LFNILSVITL TRSLQGGQGK RISRLSLLRS IVTNPLIIGL
VCGLAYAQTG LGIPQVIRQT GSYISALSLP LALLCTGASL DLRAMFRSSN VAALSSSAKL
FVVPVIMTLS GWLCGFHGAA LGIIFLFSAT PTASGSYVMT RAMGGNATLA ANIIAITTVG
SFFTTALGIY FLRSWGVI