Gene Spro_3577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3577 
Symbol 
ID5605593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3952788 
End bp3953588 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content62% 
IMG OID640939128 
Productphosphomethylpyrimidine kinase 
Protein accessionYP_001479801 
Protein GI157371812 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 
TIGRFAM ID[TIGR00097] phosphomethylpyrimidine kinase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.385467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGA TTAACGCGTT GACCATCGCC GGTACCGATC CGAGCGGGGG GGCCGGCATC 
CAGGCCGACT TGAAAGCCTT CTCCGCGCTG GGGGCCTACG GTGCCTCGGT AATCACCGCG
CTGGTGGCGC AAAATACCCG CGGCGTGCAG TCGGTGTATA ACATCGAACC GGCTTTTGTC
GCTGCCCAGC TTGATTCCGT GTTCAGCGAT TTGCGTATCG ACAGCACCAA GATTGGCATG
TTGGCCAACG CCGATATTGT GCAGGCGGTC GCGGAGCGTT TACGTCACTA TCAGCCGTCG
TTTGTGGTAC TGGATACGGT GATGCTGGCG AAAAGCGGCG ATCCTCTGCT GGCGCCGGAG
GCGGTGGAAT CGATTCGCTG CGAGCTGTTG CCGCTGGTGT CGATCATCAC GCCGAACCTG
CCGGAAGCGG CGGCCCTGCT GGAATGCGCC CCGGCGGAAA ATGAACGCCA GATGCGTGAG
CAGGGGCGAG CACTGTTGGC GATGGGTTGC CAGGCGGTAT TGATGAAGGG CGGCCATCTT
AGCGAAAGTG AAAGCCCGGA CTGGCTGTTC AGTGCGGGAC TGGAGCAACG CTTTACTGCA
CCGCGCGTAG CGACCCGCCA TACGCATGGC ACCGGCTGCA CGCTGTCTGC CGCATTGGCC
GCCCTGCGTC CGCGTCACGA CGACTGGGCA GGCACGGTGG CATCCGCCAA GGATTATCTG
CAAAAAGCCT TGCAGCAGGC CGATACGCTG GAAGTGGGGC ACGGCATCGG GCCGGTGCAT
CATTTTCACG CCTGGTGGTG A
 
Protein sequence
MKRINALTIA GTDPSGGAGI QADLKAFSAL GAYGASVITA LVAQNTRGVQ SVYNIEPAFV 
AAQLDSVFSD LRIDSTKIGM LANADIVQAV AERLRHYQPS FVVLDTVMLA KSGDPLLAPE
AVESIRCELL PLVSIITPNL PEAAALLECA PAENERQMRE QGRALLAMGC QAVLMKGGHL
SESESPDWLF SAGLEQRFTA PRVATRHTHG TGCTLSAALA ALRPRHDDWA GTVASAKDYL
QKALQQADTL EVGHGIGPVH HFHAWW