Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3555 |
Symbol | |
ID | 5605457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 3931750 |
End bp | 3933183 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640939106 |
Product | multidrug efflux system protein MdtE |
Protein accession | YP_001479779 |
Protein GI | 157371790 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTATAA AACACACCGC CTCGGTACAG TGGCAACTCT GGATTGTGGC ATTCGGCTTT TTTATGCAGA CGCTGGACAC CACCATCGTC AACACCGCCC TGCCGTCGAT GGCCGTCAGC CTGGGAGAGA ACCCGCTGCG CATGCAGTCG GTGATCGTCT CCTATGTGCT GACGGTGGCA GTAATGTTGC CTGCCAGCGG CTGGCTGGCG GATCGGGTTG GCGTCCAGCG AGTGTTCTTC AGCGCCATCG TGCTGTTCAC TCTGGGATCG ATCCTGTGTG CCCGTTCCGA AACGCTGAAC GAACTGATCG CCTCACGCGT GGTTCAGGGT ATCGGGGGCG CAATGATGGT GCCGGTCGGT CGGTTGACGG TGATGAAAAT CGTCCCGCGC GAACAGTATA TGGCGGCGAT GACCTTCGTC ACCCTGCCCG GCCAAATCGG CCCGCTGATG GGGCCGGCGC TGGGTGGTTT TTTGGTGCAG TACGCCAGCT GGCACTGGAT TTTCCTGATT AATATTCCGG TGGGGATCGC CGGGGCCATC GCCACGCTGC TGCTAATGCC CAACTACCGC ATGCAGACCC GGCGCTTCGA CATCAGCGGC TTTATCCTGC TGGCAGTCGG GATGGCGACG CTGACGCTGG CGCTTGACGG CCACAAAGGC ATGGGGCTAT CCGCTACCGC CATCGCCGGG CTGGTGGTGG CTGGCGTAGC GGCGCTAGCG GGATACTGGT GGCATGCACA CGGCAACAGC CGGGCCCTGT TCTCGCTGCG GCTGTTCAAA ACCCGGACCT ATAAGGTCGG GCTGACAGCC AGCCTGCTGG GCCGTATCGG CAGCGGCATG CTGCCGTTTA TGACACCGCT GTTTATGCAG GTCGGGATGG GCTTTTCCCC GTTCCACGCC GGGCTGATGA TGATCCCGAT GATCATCGGC AGCATGGGGA TGAAACGCAT AGTGGTGCGC GTGGTTAACC GTTTTGGGTA CCGCAACGTG CTGGTAGCCG CGACGCTGAT GCTGGCGCTG ATCAGCCTGA GTTTCCCGCT GGTGGCCATG CTCGGCTGGA TCTGGCTGCT GCCGGTGGTG CTGTTCTTCC AGGGCATGGT TAACTCACTG CGCTTCTCGG CGATGAATAC CCTGACGCTG AAAGATTTAC CGGACCGGTT GGCCAGCAGC GGCAACAGCC TGCTGTCGAT GGTGATGCAA CTGTCGATGA GCCTTGGCGT CAGTATCGCC GGTATTCTGA TCGGCAGCTT CGCCCATCAT CAGGTGGTCA CCGACAGCCC GGCTATCCAC AGCGCGTTTA TTTACAGCTA CTGCTGCATG GCATTAATCA TCGCCCTGCC CGCGTTGGCC TTCGCCCGCG TCCCGGCTGA TACCACCACT AACCGCACGC TGACCAAAGA GCCGGGCACA GGCTCCACGA GGTTGCAACA ATGA
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Protein sequence | MLIKHTASVQ WQLWIVAFGF FMQTLDTTIV NTALPSMAVS LGENPLRMQS VIVSYVLTVA VMLPASGWLA DRVGVQRVFF SAIVLFTLGS ILCARSETLN ELIASRVVQG IGGAMMVPVG RLTVMKIVPR EQYMAAMTFV TLPGQIGPLM GPALGGFLVQ YASWHWIFLI NIPVGIAGAI ATLLLMPNYR MQTRRFDISG FILLAVGMAT LTLALDGHKG MGLSATAIAG LVVAGVAALA GYWWHAHGNS RALFSLRLFK TRTYKVGLTA SLLGRIGSGM LPFMTPLFMQ VGMGFSPFHA GLMMIPMIIG SMGMKRIVVR VVNRFGYRNV LVAATLMLAL ISLSFPLVAM LGWIWLLPVV LFFQGMVNSL RFSAMNTLTL KDLPDRLASS GNSLLSMVMQ LSMSLGVSIA GILIGSFAHH QVVTDSPAIH SAFIYSYCCM ALIIALPALA FARVPADTTT NRTLTKEPGT GSTRLQQ
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