| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3517 |
|---|
| Symbol | |
|---|
| ID | 5605164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 3891974 |
|---|
| End bp | 3893437 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640939070 |
|---|
| Product | peptidase M48 Ste24p |
|---|
| Protein accession | YP_001479743 |
|---|
| Protein GI | 157371754 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000725556 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.963067 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC GGTTGACCAA AACAGCGATT GCAGTACTGT TGCTTGGCAC ACTCAACGCC
ACGGCGCCGG TGCTGGCGGA AACCCAGGAT CAACTGCCGG ATATGGGCAC CTCTGCGGGC
GGTACCCTAA GCATTGGCCA GGAAATGGCC ATGGGGGATT TTTACGTGCG TCAGCTTCGT
GCCAGCGCAC CGCTGATCAA TGACCCGTTG CTGACTCAAT ATATTAACCA GTTGGGCAAC
CGGCTGGTGG CAAGCGCCTA TTCGGTGCGT ACGCCATTCC ATTTCTATCT GGTGCGTAAC
GACGAAATCA ACGCCTTCGC CTTCTTCGGC GGCAACGTAG TGCTGCACTC CGCCCTGTTC
CGCGAAACCG ACAACGAAAG CCAGCTGGCT TCGGTGCTGG CGCATGAAAT CTCGCACGTG
ACCCAACGCC ACCTGGCGCG GGCGATGGAA GACCAGCAAC GCAATGCCCC GCTGACCTGG
GTCGGTGCCC TCGGTTCAAT CCTGCTGGCG ATGGCCAACC CTACCATGGG CATGGCGGCG
CTCAGCGGTA CCCTGGCCGG TACCCAACAG GGCATGATCA GTTTTACCCA GTCGAACGAA
CAGGAAGCCG ACCGCATCGG CATTCAGGTA TTGCAACGTG CCGGATTTGA TCCGGAAGCC
ATGCCTGACT TCTTGCAAAA ACTGTCTGAC CAGTCGCGCT ACGCGTCTAA ACCACCGGAA
ATGCTGCTGA CCCACCCATT GCCTGACAGC CGCCTGTCTG ACGCACGTAA CCGCGCCAAC
CAGATGCCCA AGCATCTGGT GCAGTCCACC CAGGATTACC TGATGGCCAA AGTGCGTTCT
CTGGGGATGT ACAGCTCCGA AGGTTACGGG CTGCGCGAAG AACTGCTCGA TACCTACAGC
AAAGGCAATA TCCGTGAGCA GGCCGCCGCC AAGTATGGCC GCGCCATTTT GTTCTATGAG
GCGAAGAAAT ATGACGACGC CCGTAACATC ATTCAGCCAC TTCTGACGCA AGATCCAAAA
AACGTCTGGC TGCTCGACCT GATGACCGAC ATCGACCTCG GCCAGAAACG TGCGCCGCAG
GCTATCGCTC GTCTGCAGGC CGCCAATGCG GCCCAAAGCA ACAATCCGGT GCTGCAGCTC
AACCTGGCTA ACGCCTATGT TGAAGGCAAC CAGCCGGCTC AGGCATCCAA AATTCTTAAC
CGTTATACCT TCGCCCACCC TGACGATCCC AATGCCTGGG ATCTGCTGGC CCAGGCCAGC
GCCGCGCAGG GGTTGCGCGA TGAAGAACTT TCCGCCCGCG CTGAAAGCCT GGCGCTAACC
GGCCGTCTCG ATCAGGCCAT AGGCCTCCTC AGCAATGCCA GTTCATTGCA AAAACTCGGC
AGTCTGAAAC AGGCGCGCTA TGATGCGCGC ATCGACCAGT TGCGCCAATT GCAGGAGCGT
TTCCGCCAGT ACCAGCGCAG CTGA
|
|---|
| Protein sequence | MTTRLTKTAI AVLLLGTLNA TAPVLAETQD QLPDMGTSAG GTLSIGQEMA MGDFYVRQLR
ASAPLINDPL LTQYINQLGN RLVASAYSVR TPFHFYLVRN DEINAFAFFG GNVVLHSALF
RETDNESQLA SVLAHEISHV TQRHLARAME DQQRNAPLTW VGALGSILLA MANPTMGMAA
LSGTLAGTQQ GMISFTQSNE QEADRIGIQV LQRAGFDPEA MPDFLQKLSD QSRYASKPPE
MLLTHPLPDS RLSDARNRAN QMPKHLVQST QDYLMAKVRS LGMYSSEGYG LREELLDTYS
KGNIREQAAA KYGRAILFYE AKKYDDARNI IQPLLTQDPK NVWLLDLMTD IDLGQKRAPQ
AIARLQAANA AQSNNPVLQL NLANAYVEGN QPAQASKILN RYTFAHPDDP NAWDLLAQAS
AAQGLRDEEL SARAESLALT GRLDQAIGLL SNASSLQKLG SLKQARYDAR IDQLRQLQER
FRQYQRS
|
|---|
| |