| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3515 |
|---|
| Symbol | |
|---|
| ID | 5605153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3889727 |
|---|
| End bp | 3890935 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640939068 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001479741 |
|---|
| Protein GI | 157371752 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0525915 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.687405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAA AAATAGTGAT CGCCGGTTCT GGTTTTGCTG GTTTTTGGGC TGCAGTTTCC
GCCATGCGAG CGATAGCGCA GGCCGGTAAG GAAGGGGAGA TCGAAGTCAC GATGGTTTCG
CCGACGCCGA ATGTCACCAT CCGTCCAAGG TTGTATGAAG CGGTGCTGGA GAACATGAGC
CCGGATATCT CGGCACAGCT CGCCGCTATT GGCGTTCGCC ATTTGGCCGG TTTGGTTGAG
CAGATAGATA GCGAAAACCA GACGCTGGTG GTGGAAAACG CAGAGGGGAA AAAGCTTCAG
CTGGATTATG ACCGTTTGGT TCTGGCGACC GGTAGCCAGC TTTCTGTTCC ACCGGTTGCC
GGTTTCGCCG AGCATGGGTT CAATGTGGAT ACGCTGCAAA GCGCGCAACG ACTGGATGCG
CATTTGAAGG CATTGGCGGC ACAACCGGAA ACCCCGGCGC GTAACACCGT GGTGGTGGTC
GGTGGTGGGC TAACCGGGTT GGAAAGCGCC GCCGAAATGC CAATGCGCCT GCGTGCCATT
CTGGGCAGCG AAGCGAACAT CCGCGTGGTG ATTGTTGATA CTGCGGCGGA AGTGGGGGCG
GGTATGGGGG CCGAACCTGG CGTGGTGATC CGACAAGCAT TGGAAGAATG CGGCGTTGAG
CCACGGGCCG GGATGCGCGT GACGGCGATC GATGCTGACA GCGTCACGCT GTCGAGCGGT
GAGCGTATTG CAACCAACAC GGTGATATTG GCTGCCGGTG TACGGGCACA TCCTTTGGTC
GCTCAAATTC CGGGTGAGCG CGACGGCTCT GGCCGCATTG TCGGCGATGC CTTCTTGCAT
GCGCCGGCGG CGGCTGGCGT TTTTGTTACC GGAGATACGG TCAAGGCAGC GACCGATGCG
TTGGGCAACC ATAATCTGAT GACCTGCCAG CATGCGATGA GCCTGGGACG CGTTGCCGGG
CACAATGCCG CAGCGGAACT GGTGGGATTG CCGCTGCACC CTTATAGCCA ACACAAGTAT
GTGACTTGCC TCGATCTCGG TGCCTGGGGT GCGCTTTACA CCGAAGGCTG GGATCGCCAG
GTGCTATTCA CACGTGCAGA GGGCAAAAAG ATCAAACAGG AAATCAACAC CCAGTGGATT
TACCCACCGG CGGCGGATCG CGATGCTTTG TTTGCCGTCG CCAATCCAGA TTTTGTGATT
GTGCCTTAA
|
|---|
| Protein sequence | MTQKIVIAGS GFAGFWAAVS AMRAIAQAGK EGEIEVTMVS PTPNVTIRPR LYEAVLENMS
PDISAQLAAI GVRHLAGLVE QIDSENQTLV VENAEGKKLQ LDYDRLVLAT GSQLSVPPVA
GFAEHGFNVD TLQSAQRLDA HLKALAAQPE TPARNTVVVV GGGLTGLESA AEMPMRLRAI
LGSEANIRVV IVDTAAEVGA GMGAEPGVVI RQALEECGVE PRAGMRVTAI DADSVTLSSG
ERIATNTVIL AAGVRAHPLV AQIPGERDGS GRIVGDAFLH APAAAGVFVT GDTVKAATDA
LGNHNLMTCQ HAMSLGRVAG HNAAAELVGL PLHPYSQHKY VTCLDLGAWG ALYTEGWDRQ
VLFTRAEGKK IKQEINTQWI YPPAADRDAL FAVANPDFVI VP
|
|---|
| |