| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3492 |
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| Symbol | |
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| ID | 5604945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 3865560 |
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| End bp | 3867641 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640939045 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001479718 |
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| Protein GI | 157371729 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.171899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATT TTTTTATTGA TCGCCCGATT TTCGCCTGGG TCCTGGCAAT TATTCTTTGC
CTGACCGGCG CTTTGGCGAT TTTTTCCTTA CCGGTGGAAC AATACCCGAA TCTGGCGCCG
CCGAACGTTC GCATTAGCGC CACCTATCCA GGTGCTTCGG CACAGACGCT GGAAAACACC
GTCACCCAGA TTATCGAACA GAACATGACG GGTCTGGACA ACATGATGTA TATGTCGTCG
CAGAGCACCA ACACCGGGCG AGCCACGGTA ACGCTGACCT TTGAAGCCGG TACCGACCCC
AACGAGGCGA TGCAGCAGGT ACAAAACCAA CTGCAGGCGG CGATTAAGCG ACTGCCGCAG
GCCGTGCAGA CCCAGGGCGT AACGGTATCG AAATCCGGTG ATACCACGCT GATGATGGTG
GCCTTCGTTT CCACCGACGG CAGCATGGAC AAGCAGGACA TTGCCGATTA CATCGTTTCC
AATCTGCAGG ATCCGCTCAG CCGCATCAAC GGCGTGGGCA GTATGGACGT TTACGGTTCG
CAATACGCCA TGCGCATCTG GCTCGATCCC AACAAACTTA ACAGTTACCA GCTCACCACC
CAGGACGTCG TCAGCGCGAT CCAATCGCAG AACGCCCAGG TCGCCGTCGG CCAGCTCGGC
GGTACACCCT CCGTCGATAA ACAGGCGCTT AACGCCACCA TCAATGCACA GTCTCAGTTG
CAAACGCCTG AACAATTCCA AAAAATTACC CTGCGAGTCA ACCAGGACGG TTCGTTAGTC
ACGCTTGGCG ATGTTGCCAC CATCGAACTC GGTGGCGAAA ACTATGACTA TCTCAGCCGC
TATAACGGCA TGCAGGCCGC CGGCATGAAC ATCAAGCTGG CCTCCGGTGC CAACGAGTTG
CAAACCGATC AGTTGGTGAA GGATAAAATC GCCGAGCTGT CGCAGTATTT CCCGCATGGG
CTGGAGGCGA AGGTCGCCTA TGAAACCACC CCGTTCGTTA AGGCCTCAAT CAAAGACGTG
GTAAAAACCC TGCTGGAAGC CATTGTGCTG GTGTTCCTGG TGATGTACCT GTTCCTGCAG
AACTTCCGCG CCACGCTGAT CCCGACCATC GCCGTGCCGG TAGTGTTGAT GGGCACCTTT
GCCATTCTTT CGGCCTGCGG ATTCAGTATC AACACCCTGA CCATGTTCGC CATGGTGCTG
GCCATCGGGC TATTGGTGGA TGACGCCATC GTGGTGGTGG AAAACGTCGA ACGCGTGATG
AGTGAAGAAG GCCTGTCGCC CAGGGATGCC ACTCGCAAAT CCATGGGGCA GATCCAGAGT
GCGCTGGTCG GCATCGCCAT GGTGTTGTCG GCGGTGTTTA TCCCAATGGC GTTCTTCGGC
GGTACCACCG GCGCCATTTA CCGCCAGTTC TCGATCACCA TTGTTTCTGC CATGGTACTG
TCGGTGCTGG TGGCGATGAT CCTCACCCCT GCCCTGTGCG CCACCCTGCT CAAACCCATT
GCCAAAGGCC ACCATCACGG CAAGCGCGGC TTCTTCGGCT GGTTCAACCG CATGTTCAAC
CGCAACGCCG ACCGCTACGA GCGCGGCGTG GCGCGGGTGC TGCACTCCAG TGTGCGTTAT
ATAGTGATTT ACCTGTTACT GCTCGGCGGC ATGGCGTTAC TGTTTATCAA GTTGCCGACC
TCCTTCCTGC CGCAGGAAGA CCGTGGCGTA TTCACCGTCC AGGTGCAATT GCCGCCGGGT
TCAACCCTGC AGCAGACCAC CAAAGTGGTG GAAAAAGTTG AACACTATTT CCTGACCAAA
GAAAAACAGG ACGTGCTGTC AGTGTTCTCC ACCATTGGCG CCGGCCCCGG CGGGAACGGG
CAGAACGTGG CACGCATGTT TATTCGCTTG AAAGACTGGG ATTTGCGTAC CTCCGGTGCC
AACAGCTCAT TCGATATCAT CGATCGCGCC ACCAAGGAAT TTAACCAAAT TATCGAGGCG
CGGGTGATTG CCAGCAGTCC ACCGGCGATT ACCGGTCTGG CAATTCTTCC GGCTTCGATA
TGGAACTCGA AGACCACGCC GGCCTGGGCC ACGACAAACT GA
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| Protein sequence | MANFFIDRPI FAWVLAIILC LTGALAIFSL PVEQYPNLAP PNVRISATYP GASAQTLENT
VTQIIEQNMT GLDNMMYMSS QSTNTGRATV TLTFEAGTDP NEAMQQVQNQ LQAAIKRLPQ
AVQTQGVTVS KSGDTTLMMV AFVSTDGSMD KQDIADYIVS NLQDPLSRIN GVGSMDVYGS
QYAMRIWLDP NKLNSYQLTT QDVVSAIQSQ NAQVAVGQLG GTPSVDKQAL NATINAQSQL
QTPEQFQKIT LRVNQDGSLV TLGDVATIEL GGENYDYLSR YNGMQAAGMN IKLASGANEL
QTDQLVKDKI AELSQYFPHG LEAKVAYETT PFVKASIKDV VKTLLEAIVL VFLVMYLFLQ
NFRATLIPTI AVPVVLMGTF AILSACGFSI NTLTMFAMVL AIGLLVDDAI VVVENVERVM
SEEGLSPRDA TRKSMGQIQS ALVGIAMVLS AVFIPMAFFG GTTGAIYRQF SITIVSAMVL
SVLVAMILTP ALCATLLKPI AKGHHHGKRG FFGWFNRMFN RNADRYERGV ARVLHSSVRY
IVIYLLLLGG MALLFIKLPT SFLPQEDRGV FTVQVQLPPG STLQQTTKVV EKVEHYFLTK
EKQDVLSVFS TIGAGPGGNG QNVARMFIRL KDWDLRTSGA NSSFDIIDRA TKEFNQIIEA
RVIASSPPAI TGLAILPASI WNSKTTPAWA TTN
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