| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3452 |
|---|
| Symbol | |
|---|
| ID | 5604725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3823151 |
|---|
| End bp | 3823831 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640939005 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001479678 |
|---|
| Protein GI | 157371689 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00186092 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTT TATTGGTCGA TGATGACCTC GAACTCGGCA CCATGCTGAG CGAATACCTG
ACCGGCGAAG GCTTTAACGC CACGCTGGTG CTGACCGGCA AGGCCGGGGT GGAAGGCGCG
CTGTCAGGTG ATTACACCGC AATGATCCTC GACATCATGC TGCCGGACAT GAGCGGCATC
GACGTACTGC GCGACGTGCG CAAGAAGAGC CGCATGCCGA TCATCATGCT GACGGCCAAG
GGCGATAACA TCGATCGGGT CATCGGCCTG GAAATGGGCG CCGACGACTA TATGCCCAAG
CCGTGCTATC CCCGCGAACT GGTGGCGCGC CTGCGTGCGG TACTGCGCCG CTTCGACGAG
CGTCCGGATG AGGTGGACGA TGAGATTGCG ATTAATTTCG GCGAACTGAC CCTTAACCCA
TCGACCCGCA GCAGCGAATG GCGCGGCAAG GCGTTTGATC TGACCGCTTC CGAATTCAAC
CTGTTGGAGT TACTGCTGCG CGCGCCGGAG CGGGTGGTAT CAAAAGACGA GCTGTCAGAA
AAAGGTTTAG GCCGCCCACG AGAAGCCTAT GACCGCAGCG TCGACGTGCA TATCAGCAAT
ATCCGCCAGA AGCTGGGGGC GTTGACGGAC AACGCGCTCA GCATTGAGAC GGTGCGCAGC
ATCGGCTATC GCATCCGATA A
|
|---|
| Protein sequence | MKILLVDDDL ELGTMLSEYL TGEGFNATLV LTGKAGVEGA LSGDYTAMIL DIMLPDMSGI
DVLRDVRKKS RMPIIMLTAK GDNIDRVIGL EMGADDYMPK PCYPRELVAR LRAVLRRFDE
RPDEVDDEIA INFGELTLNP STRSSEWRGK AFDLTASEFN LLELLLRAPE RVVSKDELSE
KGLGRPREAY DRSVDVHISN IRQKLGALTD NALSIETVRS IGYRIR
|
|---|
| |