| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3295 |
|---|
| Symbol | |
|---|
| ID | 5607323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 3647456 |
|---|
| End bp | 3648331 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640938841 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001479521 |
|---|
| Protein GI | 157371532 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.743401 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATT GGGATGACGC ACGCTTCTTC CTGGCAGTAG CCCGCTGCGG CACTTTACGA
AAGGCCGCCA ATGAACTACA CGTCGACCAG GCCACCGTCG GACGGCGTAT TACCGCTTTT
GAAGAGAGCC TGGGCTCCAA GCTGTTTATC CGCACGCCGA AATCATTCTC CCTCAGCCCT
TTGGGTGAGG AAATGCTGGC AGACGTGATG AATATGGAAA ATGCCGTGCA GGCGATTGGC
CGCAAGGCCA CCAGCGGCGA CGACAGCCTG TGCGGTAACG TGCGCATCGC CACCACCGAC
ACCATGGCCG AGGCCTTTGT CATTCCGGCC TTGAAAGCGC TGCGGGAGCA ACATCCGTTA
ATCACCGTCA CTATGCTGAC GGCGGTGAAT ATCTCTGATA TTTCTTACCG AGGAGCGGAT
TTGGCGATCC GTGGCGCCCG GCCAGAGTCC GATGAGCTGA TTATCAAACG TATGGCAACC
ATCGAAATGG GGCTGTATGC CACTCAGGAC TATCTCGACA AACACGGACT GCCGACCAAG
GGCGACCACC TGAGTGGCCA TGACCTGCTG ATGTTTCCAC GCGAGCTGGT GCCGCGCCAC
TGGAACGACT TTTGTGGCGA AGCGCTGATC GACCCCAATG TAGTTTTGCA GTGCAATTCA
CAGTTGCTGT TGCGCTCGGC AACGCGTAAC GGATTGGGCA TCGGCCTGCT GTCCTCCTTC
CTGGCGGACA AGGACCCGGA TCTGGTGCGT ATCTTCCCGG AGAATAAAGA CTGGGTAGAT
ATCTGGCTGG TACTGCACCC CGACCTGCAG CGCGCCGCGC GGGTACGTGC CGTAGTGCAG
GCGTTGGAAA CCTCGTTTAA AAACAATCCC GGTTGA
|
|---|
| Protein sequence | MMNWDDARFF LAVARCGTLR KAANELHVDQ ATVGRRITAF EESLGSKLFI RTPKSFSLSP
LGEEMLADVM NMENAVQAIG RKATSGDDSL CGNVRIATTD TMAEAFVIPA LKALREQHPL
ITVTMLTAVN ISDISYRGAD LAIRGARPES DELIIKRMAT IEMGLYATQD YLDKHGLPTK
GDHLSGHDLL MFPRELVPRH WNDFCGEALI DPNVVLQCNS QLLLRSATRN GLGIGLLSSF
LADKDPDLVR IFPENKDWVD IWLVLHPDLQ RAARVRAVVQ ALETSFKNNP G
|
|---|
| |