Gene Spro_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3279 
Symbol 
ID5607071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3622008 
End bp3623393 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content62% 
IMG OID640938825 
ProductO-succinylbenzoic acid--CoA ligase 
Protein accessionYP_001479505 
Protein GI157371516 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID[TIGR01923] O-succinylbenzoate-CoA ligase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGT TGAATGACTG GCCGTGGCGA CATTGGGCGC AGCGGCGTCC GCAGGCGGCG 
GCGCTGGTTG TCGGCCATCA GCCGGTGAGT TGGCTGGTGT TACGCCGTCA GGTGGATAAG
CTGGCGGCGG ATTTTCAACA CCAGGGGGTG GAGCCAGGCT GTGGTGTGGC GTTGTTCGGC
AAGAACAGTT ATCCCTTGTT GCTGGCCTAT CTGGCGCTGT TGCAGTGCGG TGCGCGGCTG
CTGCCGCTGA ATCCGGCGTT ACCCGTTTCT CTGTTGGCGA CGCTGTTGCC CGAGCTGGAT
ATCGACTTTG CCTTCAGCCC GGATCAACTG CCAGCCTTGC CGACCAGGAT CATCCGTTTA
AATCCCCCGT CTACCGAATC CCGCTGGCTT AATCCGCCGC GCTGGGATCC TCAGCGGTTG
GCGACCCTGA CCCTGACTTC CGGCTCCAGC GGCAGACCGA AAGCGGCCGC ACACAGTTAC
GCCGGCCATT TGGCCAGTGC CGAAGGCGTA CTGCAGTTGA TGGATTTCCA GGCGCAGGAT
CGCTGGTTGC TGTCGTTACC CTTATTTCAC GTTTCCGGAC AAGGCATTGT CTGGCGCTGG
TTGCTGGCAG GGGCCACGCT GATGGTCCGT GATATGCATC CGTTGGCCGA TGCTCTGGCG
GGCTGTACTC ATGCATCCTT GGTGCCGACT CAGCTCTGGC GCCTGCTGGC ACAGCCGCTG
GCAGCCCTGA CGCTGAAAAA AGTGCTGCTG GGGGGCGCGA TGATCCCGGT AGAACTGACC
AAACAGGCAG AGGCTACGGG CATCCGCTGC TGGTGTGGCT ATGGCCTGAC TGAACTGGCT
TCCACGGTGT GTGCCAAGCG TGCCGATGCA CGGCCGGGCG TTGGGCTGCC GCTGGCCGGT
CGGGAAATTA AGCTGGTGAA TGAAGAGGTG TGGATCCGCG GGCGGAGTCT GGCGCTGGGA
TACTGGCTAC AGGGTTGCTT GCTGCCGATT GTCGATGATC AGGGCTGGTT CCATACCCGC
GATCGTGGCG TCATGGAGCA GGATGAGCTG CGGATTATCG GCCGGTTGGA CAACCTGTTT
TTCAGCGGCG GAGAAGGCGT TCAGCCAGAA GATATTGAGC GCGTATTGGC GGCCCATCCG
CAAATTTCAC AGGTGGTGGT GGTGCCGGTG GATGACGCCG AGTTTGGTCA ACGGCCGGTC
GCGGTGATCG ACAGTGAGGA GTCTCTCTCG CTGGACGAGC TGCTGGCCTG GTCGCAGGAC
CGGCTGGTGA ACTTCCAGCG GCCAATGGCG CTGTTGGCGA TGCCGAATGA GCTGAAGGCC
GGGGGTATCA AGATCTCGCG CCGTCAGTTG CAGCAATGGG CGGTGGAGCA GATCTCGGCT
CAATAA
 
Protein sequence
MAQLNDWPWR HWAQRRPQAA ALVVGHQPVS WLVLRRQVDK LAADFQHQGV EPGCGVALFG 
KNSYPLLLAY LALLQCGARL LPLNPALPVS LLATLLPELD IDFAFSPDQL PALPTRIIRL
NPPSTESRWL NPPRWDPQRL ATLTLTSGSS GRPKAAAHSY AGHLASAEGV LQLMDFQAQD
RWLLSLPLFH VSGQGIVWRW LLAGATLMVR DMHPLADALA GCTHASLVPT QLWRLLAQPL
AALTLKKVLL GGAMIPVELT KQAEATGIRC WCGYGLTELA STVCAKRADA RPGVGLPLAG
REIKLVNEEV WIRGRSLALG YWLQGCLLPI VDDQGWFHTR DRGVMEQDEL RIIGRLDNLF
FSGGEGVQPE DIERVLAAHP QISQVVVVPV DDAEFGQRPV AVIDSEESLS LDELLAWSQD
RLVNFQRPMA LLAMPNELKA GGIKISRRQL QQWAVEQISA Q