Gene Spro_3201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3201 
Symbol 
ID5605984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3524650 
End bp3525936 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content61% 
IMG OID640938743 
Productinner-membrane translocator 
Protein accessionYP_001479427 
Protein GI157371438 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.427646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAT CTATGGTTCA CCCAGGGCTG AACGTTAAAC GCAGCCTGCT GGATGCGGTG 
CTGGCCGGGC TGATCGCCCT GATCGTCTTC GGGCCGATCG TCGGTATTGT TCTCAACGGA
TACAGTTTTA ACTTTGAACC GCGCCGCCTG GCGTGGATTA TCGCCGCGGT AATGGCCGGG
CGGCTGTTGC TCAGCCTGTT CCTGCAAACC GCGCCGGGGC GGAAATTGTT GACGCGTTTT
GACGGCGGCA ATGACGGGGT GTATGTCCGG CCGATAGGGG CCAAAACCAG TCTGCGATGG
ATCATCCCGT TAATGGCGGT GATCGCGCTG CTGTTTCCGT TTGTCGCCAC CAAGTACCTG
CTGACGGTGG CGATCCTGGG GCTGATTTAC GTGCTGCTTG GGCTGGGGTT GAACATTGTT
GTCGGGCTGG CCGGGCTGCT GGATCTCGGT TATGTGGCGT TCTACGCCAT TGGCGCTTAT
GGCCTGGCGC TGGGTTATCA GTATCTCGGG CTGGGGTTCT GGGCGATGTT GCCGCTGGGG
GCGCTGATGG CCGCGCTGGC CGGTGCGCTG CTGGGGTTCC CGGTGCTGCG CATGCACGGT
GACTATCTGG CGATCGTCAC GCTGGGGTTC GGGGAAATTA TCCGCCTGGT GCTGAATAAC
TGGATGTCGC TGACCGGTGG CCCCAACGGC GTCTCGGTGC CTGCGCCGAC GATTTTTGGC
CTGGAATTTG GCCGACGGGC GAAGGACGGC GGGGTGCCGA TCCACGAATT CCTCGGTATC
GCCTATAACC CCAACCTGAA ATTTATCTTT ATCTATGCGG TGCTGTTCCT GGTGGTGCTG
CTGGTGCTGT ACATCAAGCA CCGGCTGACG CGCATGCCGA TCGGCCGCGC CTGGGAGGCA
CTGCGCGAGG ATGAAATCGC CTGTCGCTCG CTCGGGCTGA ACCACGTTCT GGTGAAGCTG
TCGGCCTTTA TGATGGGTGC CTCTACCGCC GGGCTGGCCG GGGTGTTTTT TGCCACTTAT
CAGGGCTTCG TCAACCCCAC CTCATTCACC TTCTTTGAGT CGGCGCTGAT CCTGGCGATC
GTGGTGCTGG GCGGTATGGG CTCGACCATC GGCGTAGTGC TGGCGGCGTT TGTACTCACG
GTGGCACCTG AGCTGTTACG TAGTTTTGCC GAGTACCGGG TGCTGCTGTT TGGCGTGTTG
ATGGTGGCGA TGATGATCTG GCGGCCGCGT GGGCTGGTGC GCATCAGTCG TTCCAGTTTT
GCTCCGCGCA AGGGGGTAGA GCCATGA
 
Protein sequence
MSQSMVHPGL NVKRSLLDAV LAGLIALIVF GPIVGIVLNG YSFNFEPRRL AWIIAAVMAG 
RLLLSLFLQT APGRKLLTRF DGGNDGVYVR PIGAKTSLRW IIPLMAVIAL LFPFVATKYL
LTVAILGLIY VLLGLGLNIV VGLAGLLDLG YVAFYAIGAY GLALGYQYLG LGFWAMLPLG
ALMAALAGAL LGFPVLRMHG DYLAIVTLGF GEIIRLVLNN WMSLTGGPNG VSVPAPTIFG
LEFGRRAKDG GVPIHEFLGI AYNPNLKFIF IYAVLFLVVL LVLYIKHRLT RMPIGRAWEA
LREDEIACRS LGLNHVLVKL SAFMMGASTA GLAGVFFATY QGFVNPTSFT FFESALILAI
VVLGGMGSTI GVVLAAFVLT VAPELLRSFA EYRVLLFGVL MVAMMIWRPR GLVRISRSSF
APRKGVEP