Gene Spro_3120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3120 
Symbol 
ID5604653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3434831 
End bp3435805 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content58% 
IMG OID640938662 
ProductAraC family transcriptional regulator 
Protein accessionYP_001479348 
Protein GI157371359 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACCT TTCTGATTAT CGTCCCCGAA GGGGGCATGT TATTCGAGTC GGCAGGCATT 
GCCGACATCC TGATGCAAGC CAACCGCTTG AGGCCCAACG ACGCTCCGCT CTACCGGATG
GCGATCGTCA CCACCCAATC TCACCGGGTG GTGCATGGGT CGTCCGGCTT GAATCTGTTG
GCCGATCATC GTCTTTCAGA TCTCGACCCA GAGCAGGAAC GCGACACCAT CATAGTGACC
GGAAAAGGCG CGACCGAGGA AGAGAGTGCC TATGTTGTCG ACTGGCTACG GCGTGCCGCA
CCCAAGGCGC GGCGTATTGC GTCGGTTTGC GGTGGGGCGT TGCTGCTGGC CGAAGCCGGT
TTGCTGGATG GACGCCGTGC CACCACCCAT TGGCGATTAC TGGAAACCTT GCAGACTCGT
TTCCCAAAAG TGCAGGTCGA AAATGGGCCG TTGTACGTGC AGGATGGTTC CGTCTGGACT
TCGGGCGGGG TCAGTTCCGG CTTCGATCTC ACCCTGGCGC TGGTGGAAGA CGATTACGGT
TTTGTTCAGG CACGCGAAGT GGCGCAAGAT CTGGTGATGT TCCTGCGTCG GCCTGGCGGT
CAGGCGCAGT TCAGCCGTTA CCCGTTGAAT CAGGCTAAAA CCCCTGGCCC AATCCGCGAT
CTTCAGTCGT GGATCCTGGA GAATCTGGCC GCAGACCTTT CCGTTGAGCA GTTGGCGGAA
CGGGTCGCCA TGAGTCCGCG TAACTTTACC CGGGTGTTCA CGCGTGAGAC CGGGATCTCC
CCCGCCAAAT TTGTTGAAGA AGGGCGTTTA TATCTGGCCC GGCAACGCCT GGAGCAGAGT
GCGGAAGGTA TTGAGCAAAT CGCCATCAGT TGCGGGTTTG GCAATGGCCT CAATCTGCGG
CGCGTTTTTG AACGACATTT GCAACTCTCA CCTACCGAGT ATCGCGAGCG TTTTCATTCC
CGCATGTTGG CCTAA
 
Protein sequence
MHTFLIIVPE GGMLFESAGI ADILMQANRL RPNDAPLYRM AIVTTQSHRV VHGSSGLNLL 
ADHRLSDLDP EQERDTIIVT GKGATEEESA YVVDWLRRAA PKARRIASVC GGALLLAEAG
LLDGRRATTH WRLLETLQTR FPKVQVENGP LYVQDGSVWT SGGVSSGFDL TLALVEDDYG
FVQAREVAQD LVMFLRRPGG QAQFSRYPLN QAKTPGPIRD LQSWILENLA ADLSVEQLAE
RVAMSPRNFT RVFTRETGIS PAKFVEEGRL YLARQRLEQS AEGIEQIAIS CGFGNGLNLR
RVFERHLQLS PTEYRERFHS RMLA