| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3095 |
|---|
| Symbol | |
|---|
| ID | 5604405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 3404020 |
|---|
| End bp | 3405495 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640938635 |
|---|
| Product | succinic semialdehyde dehydrogenase |
|---|
| Protein accession | YP_001479323 |
|---|
| Protein GI | 157371334 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.628741 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0354959 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATC ACTTCTCTGC CACCCTCAAA GATCCTGCGC TGTTCCGCGA GGCCAACTAT
ATCGATGGGC AATGGCTGCC GATCAAAGGC GACCAGAGCA TCAAGATCCA CAATCCTGCT
ACCGGCGAAC GGGTCGGTCA GGTGCCGGCG TTCGGCGCCA GGGAAACCGC ATTGGCGATC
GCTGCCGCGA AAAAGGCCCA GCCGGCCTGG CGCACATTGA CCGCCAAAGA ACGTGCCGGC
AAACTGCGCC GCCTGTTCGA GTTGATGATG GAGAATCAGG ACGATTTGGC GCTGATCATG
ACCGCAGAAC AGGGCAAGCC GCTGGCTGAA AGCCGGGGTG AGATTGCCTA CGCGGCGTCC
TTTATCGAAT GGTTTGCCGA AGAAGGCAAA CGCGTCTACG GCGACACCAT TCCGCAGCCC
CAGGCAGGGC GCCGCATTAT CGTGCAGAAA GAGCCGATTG GGGTCTTCGC GGCCATTACG
CCGTGGAATT TCCCGGCGGC GATGATCACC CGTAAAGCAG GCCCCGGCTG GGCTGCGGGC
TGTACCGGGG TGATCCGCCC CGCCAGCCAA ACTCCCTTCT CTGCACTGGC CATCGCCGTG
CTGGCCGAGC GTGCGGGCTT ACCGGCCGGC GTCTGCAACG TTATCACCGG CCCGAGCCAG
GCCATAGGGG CGGAATTGAC CGCCAACCCG GACGTACGCA AGCTCTCCTT CACCGGCAGC
ACCGAGGTCG GTGCGCAACT GCTGGCACAG TGTGCCCCGA CCATCAAAAA GACCAGTATG
GAGCTGGGCG GCAACGCGCC GTTTATCGTG TTTGACGATG CCGATCTGGA CGCCGCTGTG
ACAGGCGCAG TCGCTTCCAA ATACCGCAAT GCCGGCCAGA CCTGCGTGTG TACCAACCGT
TTTCTGGTTC AGGACGGCAT CTACGACGCT TTCGCCGAAA AACTGAAGGC GGCGGTAGAA
AAGCTTAAGG TCGGCAACGG CCTGGACGAC GGAGTGACTA TCGGCCCGTT AATTAACCCG
GCCGCCGTGG AAAAGGTCAA CGAGCATATC GCCGACGCGG TGCAGTTGGG TGCCAGGGTT
CTGCTGGGAG GCAAACCCCA TGCGCTGGGC AATAATTTCT TTACGCCGAC CATTCTGACC
GAGGTGCCAC GACAGGCCAA AATCTTCCAT GAAGAGACCT TTGGCCCGGT AGCACCGCTG
ATCCGTTTCA ATAGCGAAGC CGAAGCCATT GAGCTGGCCA ATGACACGCC GTTTGGCCTG
GCCTCGTACT TCTACAGCCG GGATATTGGC CGGGTCATGC GCGTCGCCGA GGCGCTGGAA
TACGGCATCG TCGGCATTAA TGAAGGGCTG ATTTCCACCG AAGTCGCCCC CTTCGGCGGG
GTTAAAAACT CCGGGCTGGG CCGTGAGGGG TCAAAATACG GTATCGAGGA TTATCTTGAG
ATTAAGTACC TGTGCCTCGG TGGGCTGGGG AACTAA
|
|---|
| Protein sequence | MSNHFSATLK DPALFREANY IDGQWLPIKG DQSIKIHNPA TGERVGQVPA FGARETALAI
AAAKKAQPAW RTLTAKERAG KLRRLFELMM ENQDDLALIM TAEQGKPLAE SRGEIAYAAS
FIEWFAEEGK RVYGDTIPQP QAGRRIIVQK EPIGVFAAIT PWNFPAAMIT RKAGPGWAAG
CTGVIRPASQ TPFSALAIAV LAERAGLPAG VCNVITGPSQ AIGAELTANP DVRKLSFTGS
TEVGAQLLAQ CAPTIKKTSM ELGGNAPFIV FDDADLDAAV TGAVASKYRN AGQTCVCTNR
FLVQDGIYDA FAEKLKAAVE KLKVGNGLDD GVTIGPLINP AAVEKVNEHI ADAVQLGARV
LLGGKPHALG NNFFTPTILT EVPRQAKIFH EETFGPVAPL IRFNSEAEAI ELANDTPFGL
ASYFYSRDIG RVMRVAEALE YGIVGINEGL ISTEVAPFGG VKNSGLGREG SKYGIEDYLE
IKYLCLGGLG N
|
|---|
| |