| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3091 |
|---|
| Symbol | |
|---|
| ID | 5604386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3400918 |
|---|
| End bp | 3401823 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640938631 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001479319 |
|---|
| Protein GI | 157371330 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0637726 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGGT TGGACGAACT GGCGATTTTT GTAGCGGTGA TCCAGCACGG CAGCCTGGCC
GCCGCCGGTC GCAAACTGCG ACGTTCCGCC CCGGCAGTGA CCCGGGCCAT CGCCTCGCTG
GAGCAGCGTT TTGGCGCCCG GCTGGTTGAA CGCACCACCC GGCGGCTGGC CCCGACCGAA
GCCGGGCTGC GGCTGGCGGA GCGCGCGCAT TTACTGCTGC ATGAATACCA GGCGGCGGTA
CTGGATACGG CGGATACTCA GCTCAGCGGC CTGCTGCGCA TTACCTCGCC GGTGCAGTTC
GGGCGCAAGC ACGTGGCACC GGTAGTCATG GCGTTTCTCG ATCTTTATCC GCAGATGCAA
ATTGAAATGG TGCTCAACGA TCGCAACCTG GATTTGATCG ACGAGGGGCT GGACGTGGCG
GTGCGCATCG GCCATTTGCA GGACTCTTCC CGCGTGGCGC GTCGGTTGGG GCAGGTATCC
CGGGTGACGG TCGCCAGTCC GGCCTATCTG GCGCTACGCG GCGAGCCATT GGAACCGGCG
CAGTTGGTCG ATCATGATAC CATCGTCGGC ACCCAGCGGG CGTCGCTGCG CGAATGGCGG
TTTGGCCCAC AGGAAAACGG TGACAGGGTA AGGCTGACGC CGCGCTTGCT GCTCAACGAA
GTCGAAACCC AGTTGCTGGC GGCGCGAGCC GGCAAGGGCA TCGCCCGGTT GCTGTCGTAT
CAGGTGGCAG ACGATCTGGC AGCGGGGACG CTGGTGCGTT TGCTGCCGGC GTTTGAACCC
TTGCCGATGC CGGTGCAGCT GGTGGCGCAA AATAGCCAAC GCATGCCGCT AAAGGTGCGG
ACCTTCTGGG ATTATGCCTG GCAGGAATTA AGTCAATTGG CGCAAATTCA GCCGCCGTTA
AAATAG
|
|---|
| Protein sequence | MDRLDELAIF VAVIQHGSLA AAGRKLRRSA PAVTRAIASL EQRFGARLVE RTTRRLAPTE
AGLRLAERAH LLLHEYQAAV LDTADTQLSG LLRITSPVQF GRKHVAPVVM AFLDLYPQMQ
IEMVLNDRNL DLIDEGLDVA VRIGHLQDSS RVARRLGQVS RVTVASPAYL ALRGEPLEPA
QLVDHDTIVG TQRASLREWR FGPQENGDRV RLTPRLLLNE VETQLLAARA GKGIARLLSY
QVADDLAAGT LVRLLPAFEP LPMPVQLVAQ NSQRMPLKVR TFWDYAWQEL SQLAQIQPPL
K
|
|---|
| |