Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3083 |
Symbol | |
ID | 5604358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 3392758 |
End bp | 3393696 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640938624 |
Product | PaaX family transcriptional regulator |
Protein accession | YP_001479312 |
Protein GI | 157371323 |
COG category | [K] Transcription |
COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
TIGRFAM ID | [TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.415086 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACATA AACTGGATGA GTTTATCCGC CATGCTATAG ACGCCCAGCC GATCAGCGGC ACTTCACTGA TTATCTCCCT GTACGGCGAT GCGCTGAGTC ATCGCGGTGG CGAAGTTTGG CTCGGCAGCC TGAGCGCACT GCTGGAAGCG CTGGGTTTCG GAGACCGCTT TGTGCGCACT TCGGTATTTC GCCTGCAAAA AGAGGGCTGG CTGGAGGTCG AAAAAATCGG TCGTCGCAGC TTCTATCGGG TGACCGAACA GGGTATGCGC CAGTTCCGCC ACGCCGAGTC GAAAATCTAC CTCAGCGAGC CACCGGCCTG GGACGGAAAA TGGGATCTGT TGTTGCTGGA AAGCGCGGAG AAAAGCGAGC GGGCACGGCT GAAAAAAGAG CTGGGCTGGC TGGGTTTTGG TCAAATCGCC AATAACCTGA TGGCGGCGCC AACCCATGCG CAAACCGACG TCACCGCGCT GCTCGGCGAG CTTAACGCCA GCGAACAAGC GATCTATTTT CGTGCCGATT ACCCCTATAA CCGCTCCGAG CATACTCTGC AGCAGCTGGT GGCCAACTGT TGGGCGCTGG GCGAGGTCGC CGCCGATTAT CATGAGTTTA TCGTCTCTTT CCGCCCGCTA ATGGCGTTGC TGCGCGAAAC CGACGATGCC CTGCTGACGC CCCAGCGCTG TTTCCAGATT AAGCTATTAT TGATCCACTT CTTCCGCCGC GTGGTGCTTA AAGATCCGCT GCTGCCGGAC GCCTTGTTGC CCGCCCAGTG GGAGGGGCAG ATCGCCCGCA ACCTGTGTAT CAATATTTAT CAGCGGGTGG ACCGCGCCGC GACCGAGTAT GTCAGCGCGC TGGCGGAAAC CACTATCGGC ACCCTGCCCG CCCCGGCGGC CGGCTATTAC CGGCGCTTTG GCGGCCTGCC GCGCGATCCT TCATTTTAA
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Protein sequence | MEHKLDEFIR HAIDAQPISG TSLIISLYGD ALSHRGGEVW LGSLSALLEA LGFGDRFVRT SVFRLQKEGW LEVEKIGRRS FYRVTEQGMR QFRHAESKIY LSEPPAWDGK WDLLLLESAE KSERARLKKE LGWLGFGQIA NNLMAAPTHA QTDVTALLGE LNASEQAIYF RADYPYNRSE HTLQQLVANC WALGEVAADY HEFIVSFRPL MALLRETDDA LLTPQRCFQI KLLLIHFFRR VVLKDPLLPD ALLPAQWEGQ IARNLCINIY QRVDRAATEY VSALAETTIG TLPAPAAGYY RRFGGLPRDP SF
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