Gene Spro_3039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3039 
Symbol 
ID5604120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3347791 
End bp3348993 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content61% 
IMG OID640938580 
Productbeta-ketoadipyl CoA thiolase 
Protein accessionYP_001479268 
Protein GI157371279 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCG CTTACCTGTG TGATGCCGTC CGTACGCCTT TTGGTCGACT CAACGGCAGC 
CTGGCCAGCA TTCGCGCCGA CGACCTGGCC GCCCTGCCGC TCAAAGCGTT GCAGGCGCGC
CACCCACAAC TTGACTGGGC GGCAGTGGAC GACGTGCTGC TTGGCTGTGC CAATCAGGCC
GGAGAGGATA ACCGCAACGT GGCGCGCATG GCGTTGCTGC TGGCCGGGCT GCCGGTACAG
ATCCCCGGTT GTACCCTCAA CCGCCTGTGC GGCTCCAGTC TGGACGCCGT GGCGATGGCG
GCCCGGGCGA TCAAAACCGG CGAAAGTGAA CTGATGATCG CCGGCGGTGT AGAAAGCATG
TCCCGTGCGC CCTTCGTGAT GGGCAAGGCG GAAAGCGCCT TCAGCCGAAT GATGAAACTG
GAAGACACCA CCATGGGCTG GCGGTTTATC AACCCACAGA TGCAGGCGCT ATATGGCGTG
GAGTCGATGC CGCAAACCGC CGAAAACGTC GCCCTCAAAT TCGGGATTAA CCGCCAGGAT
CAGGACGCCT TTGCCCTGCG CAGCCAGCAG CGCACCGCTA GCGCGCAGGA AAGCGGCTTT
TTCGCCGAAC AGTTGATTGA AGTCAGCGTT GCGCAGAAAA AAGGTGCACC GTTACTGTTC
ACTCAGGACG AACACCCGCG CGCCACCACG CTGGAAGCCC TGTCGAAGCT GAAACCGGTG
GTTAACCCTC AGGGAACAGT GACCGCCGGT AATGCTTCCG GGCTGAACGA CGGTACCTGC
GCGCTGCTGC TGGCCAGCGA AACCGGGATG ACTCGCCACG GACTGCAACC CATGGCCCGT
ATTATCGCCA GCGCCGTTAC CGGTATTGAG CCTTCAATTA TGGGCTTTGC CCCGGCTCAA
GCGGTACGCA AGGTATTAAA AATTGCCGGG CTGAGCCTCG ACCAAATGGA CGTGATTGAG
CTTAACGAAG CTTTTGCGGC ACAGGCATTG GCGGTGACGC GTGAACTGGG GCTGAGTGAC
GACGCCGCTC AGGTGAATCC CAATGGCGGT GCGATCGCCC TCGGTCATCC GCTGGGTGCT
TCCGGTGGCA GGCTGGTGAT GAACGCCGCC TGGCAATTGC AAAAGACGCG CGGCCGCTAT
GGCTTGTGCA CTATGTGTAT TGGCGTCGGC CAGGGCATTG CACTGATTAT CGAACGGGTA
TGA
 
Protein sequence
MIPAYLCDAV RTPFGRLNGS LASIRADDLA ALPLKALQAR HPQLDWAAVD DVLLGCANQA 
GEDNRNVARM ALLLAGLPVQ IPGCTLNRLC GSSLDAVAMA ARAIKTGESE LMIAGGVESM
SRAPFVMGKA ESAFSRMMKL EDTTMGWRFI NPQMQALYGV ESMPQTAENV ALKFGINRQD
QDAFALRSQQ RTASAQESGF FAEQLIEVSV AQKKGAPLLF TQDEHPRATT LEALSKLKPV
VNPQGTVTAG NASGLNDGTC ALLLASETGM TRHGLQPMAR IIASAVTGIE PSIMGFAPAQ
AVRKVLKIAG LSLDQMDVIE LNEAFAAQAL AVTRELGLSD DAAQVNPNGG AIALGHPLGA
SGGRLVMNAA WQLQKTRGRY GLCTMCIGVG QGIALIIERV