Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2842 |
Symbol | astD |
ID | 5603120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 3118420 |
End bp | 3119892 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640938383 |
Product | succinylglutamic semialdehyde dehydrogenase |
Protein accession | YP_001479071 |
Protein GI | 157371082 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00731207 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCACATC CTGCACTGTT TATTAATGGC GCCTGGCAGC AGGGCCGTGG TGCTGAATTC AGCAAAACCG ATCCGGTCGA CAATCAGCCG CTGTGGCAGG CTAACGCCGC CGACGGCAGC GATGTGGCCG CCGCTTGTGA AGCCGCTCGT GCCGCATTCC CGGCCTGGGC GCGCACGCCG TTTGAACAAC GCGAACAGTT GGTAAAACGT TTTGCTGCGC TGTTGGAAGA GCACAAGTCG CATTTGGCGG CCACCATCAG CCGTGAAACC AGCAAACCCC GTTGGGAAAC GCTGACCGAA GTCCAGGCGA TGATCGGCAA AGTGGCGATT TCCCTGCAGG CTTATCAGGT GCGTACCGGC GTTAGCCAGA CCGCGATGGC GGACGGGGCT TCGGTGCTGC GCCACCGGCC ACACGGCGTG CTGGCGGTGT TTGGGCCTTA CAACTTCCCC GGCCATTTAC CCAATGGGCA CATCGTACCT GCCTTGCTGG CGGGTAACAC GGTGGTATTC AAGCCGAGTG AGCTGACCCC GCAGACCGCT GAGGAAACCC TGAAACTATG GCAGCAGGCC GGTTTGCCTG ACGGGGTGAT TAATATGGTG CAGGGCGGAC GTGAAACCGG CGAGGCGCTG GCCGCCAGCA CCGATATCGA CGGTCTGCTG TTTACCGGCA GCGCCGGCAC CGGTTATCAC CTGCATCGTC AGTTGGCGGG GCAGCCTGAG AAAATTCTGG CCTTGGAAAT GGGCGGCAAC AACGCGCTGA TTGTTGACCA AATTGAAGAC TGCGATGCGG CGGTCAACCT GGCGATCCAG TCGGCGTTTA TTTCCGCCGG GCAGCGCTGC ACCTGTTCGC GCCGTATTCT GGTGAAACGC GGCAGTGAGG GCGATGCCTT TATCGAGCGT TTGGTGCAGG TAGCCAGTGC GTTGCGTATT GGGCGTTGGG ACGCTGAACC CCAGCCGTTT ATGGGCGGGG TGATCTCTTC CGCGGCGGCA GAAAAAATGC TGGCGGCACA ACATCACCTG CTGTCGCTGG GCGGCAAAGC CTTGCTGACC ATGCAGCGCC TGGAAAGTGG CAGCGCGTTG CTCAGCCCCG GCATTATTGA CGTGACTGGC GTGCGTGACG TGCCGGACGA AGAGTACTTT GGCCCACTGA CGACCATCAT TCGCTATAAC GACTTTGATG AAGCCGTGCG TATCGCCAAC CAGACGCGCT ATGGCCTGTC GGTCGGTCTG GTATCGCCGC AGCGTGAGCG CTTTGACCAC CTGTTGCTGG AAGCGCGCGC CGGTATCGTC AACTGGAACA AGCCGTTGAC CGGGGCTTCC AGTGCGGCAC CGTTCGGCGG TGTGGGGGCC TCCGGCAACC ATCGTCCAAG CGCCTACTAC GCGGCGGATT ATTGCGCCTG GCCAATGGCG TCGCTGGAAA GCGAAAGTTT GACGTTGCCG GCCAGCCTGT CACCAGGACT GTCATTTAAT TAA
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Protein sequence | MSHPALFING AWQQGRGAEF SKTDPVDNQP LWQANAADGS DVAAACEAAR AAFPAWARTP FEQREQLVKR FAALLEEHKS HLAATISRET SKPRWETLTE VQAMIGKVAI SLQAYQVRTG VSQTAMADGA SVLRHRPHGV LAVFGPYNFP GHLPNGHIVP ALLAGNTVVF KPSELTPQTA EETLKLWQQA GLPDGVINMV QGGRETGEAL AASTDIDGLL FTGSAGTGYH LHRQLAGQPE KILALEMGGN NALIVDQIED CDAAVNLAIQ SAFISAGQRC TCSRRILVKR GSEGDAFIER LVQVASALRI GRWDAEPQPF MGGVISSAAA EKMLAAQHHL LSLGGKALLT MQRLESGSAL LSPGIIDVTG VRDVPDEEYF GPLTTIIRYN DFDEAVRIAN QTRYGLSVGL VSPQRERFDH LLLEARAGIV NWNKPLTGAS SAAPFGGVGA SGNHRPSAYY AADYCAWPMA SLESESLTLP ASLSPGLSFN
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