Gene Spro_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2813 
Symbol 
ID5602577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand+ 
Start bp3094564 
End bp3095535 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content55% 
IMG OID640938354 
ProductPTS system mannose/fructose/sorbose family IIB subunit 
Protein accessionYP_001479042 
Protein GI157371053 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA
[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component
[TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.047129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAATAG CTATTATCAT CGGCACACAC GGGACCGCAG CAGAACAATT GCTGAAGACC 
ACGGAAATGC TATTGGGCGA ACAGGATAAC GTCGCTTTTA TAGATTTCGT CCCCGGTGAG 
AATGCCGAAA CGTTAATCGA GAAGTACAAG GGTAAAATCA GCGGACTAGA CACCAGCGGT 
GGCGTCCTGT TCCTGGTGGA TACCTGGGGC GGCAGCCCGT TCAACGCGGC CAGCCGCATC 
GCCGTCGATA AAGAGAACTA TGAGGTCGTC ACCGGGGTTA ACATTCCGAT GCTGGTGGAA 
ACGTTCATGG CACGAGACGA CAACCCTGGC TTCGACGAAC TGGTCGCGCT GGCGTTGGAA 
ACCGGCCGTG AAGGCGTGAA AGCGCTGAAA AAACCGGCCG AAGAGAGTGT TAAGCCCGCG 
GCACCACAAA GTGCTCCCAC CGCTAAACCC GCCGCCCCTC AGGCGCCGCT GGGTCCCAAT 
GACCATATGA AAATCGGCCT GGCCCGTATC GATGACCGTT TGATCCACGG TCAGGTCGCG 
ACCCGTTGGA CCAAGGAAAC CGACGTCAGC CGTATCATCG TGATCAGCGA CGAAGTCGCC 
GCCGACCACG TTCGCAAAAC CTTGCTGACT CAGGTTGCCC CGCCGGGCGT CACCGCACAC 
GTGGTCGACG TGGCGAAAGC CATCCGCGTG TGGAACAACC CGAAATATGC CGGCGATCGC 
GTGATGCTGC TGTTCACCAA TCCGACCGAT GTCTGGCGTT TGGTGGAAGC CGGCGTGGAT 
ATCAAATCGG TGAATATCGG TGGTATGGCG TTCCGTCAGG GCAAAACCCA GGTGAACAAC 
GCCGTCTCGG TTGACGAAAA AGATATCGAA GCGTTTAAGA AATTAAACGA GCGCGGTATT 
GAATTGGAAG TTCGTAAAGT CTCGTCCGAC AGTCGGTTAA AAATGATGGA CCTGATTAAC 
AAACTCAATT AA
 
Protein sequence
MAIAIIIGTH GTAAEQLLKT TEMLLGEQDN VAFIDFVPGE NAETLIEKYK GKISGLDTSG 
GVLFLVDTWG GSPFNAASRI AVDKENYEVV TGVNIPMLVE TFMARDDNPG FDELVALALE 
TGREGVKALK KPAEESVKPA APQSAPTAKP AAPQAPLGPN DHMKIGLARI DDRLIHGQVA 
TRWTKETDVS RIIVISDEVA ADHVRKTLLT QVAPPGVTAH VVDVAKAIRV WNNPKYAGDR 
VMLLFTNPTD VWRLVEAGVD IKSVNIGGMA FRQGKTQVNN AVSVDEKDIE AFKKLNERGI 
ELEVRKVSSD SRLKMMDLIN KLN