Gene Spro_2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2709 
Symbol 
ID5606625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2985728 
End bp2986645 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content52% 
IMG OID640938248 
ProductUTP--glucose-1-phosphate uridylyltransferase subunit GalU 
Protein accessionYP_001478938 
Protein GI157370949 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0430379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000506097 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCTGCTG TAAATCGTAA AGTCAGAAAG GCTGTGATCC CGGTTGCAGG CTTGGGAACA 
CGGATGTTAC CGGCGACAAA AGCCATTCCT AAAGAAATGC TGCCGCTGGT TGACAAACCC
TTGATCCAAT ACGTTGTCAA TGAGTGTATT GCGGCAGGGA TTAACGAAAT TGTGTTGGTT
ACCCATTCCT CCAAGAATTC GATCGAAAAC CATTTCGATA CCAGTTTTGA ACTGGAAGCG
ATGCTGGAAA AACGAGTTAA GCGTCAGTTG CTCGATGAAG TGCAGTCTAT CTGTCCCAAG
GGCGTTACCG TAATGCAGGT GCGTCAGGGG GTGGCTAAAG GCTTGGGTCA CGCGATTATG
TGTGCCTATC CACTGGTGGG TGACGAACCG GTGGCGGTGA TTTTGCCGGA CGTGATCCTC
GATGAGTACA GTTCCGATCT GAAAAAAGAC AATCTGCACG AAATGCTGCA GCGCTTTGAG
CAAACCGGTA TCAGCCAGAT TATGGTGGAG CCTGTGCCGC ATAAAGATGT TGGCAACTAT
GGCGTGGCCG ATTGCAAAGG GTATGAGCTG CAGCCGGGCG AAAGCGCCCC GATGGTTAGC
GTGGTAGAGA AACCTTCGCC GGATGAAGCC CCTTCCAACC TGGCCATTGT TGGCCGTTAT
GTGCTCTCCG CCGATATCTG GCCGCTGCTG TCGAAAACCC CTCCGGGTGC GGGTGGTGAA
ATCCAGCTGA CCGACAGCAT TGAAATGCTG ATGCAGCAAG AGACGGTAGA GGCGTATCAC
CTGAAAGGGA TCAGCCATGA TTGCGGCAAC AAGCTGGGTT ATATGCAGGC ATTTGTCGAG
TATGGCATGC GCCATGCCGG GCTGGGCCAA GAGTTCACTC AGTGGTTGAA ACAGTTACTG
GCCGCTGATA AAAAATAA
 
Protein sequence
MPAVNRKVRK AVIPVAGLGT RMLPATKAIP KEMLPLVDKP LIQYVVNECI AAGINEIVLV 
THSSKNSIEN HFDTSFELEA MLEKRVKRQL LDEVQSICPK GVTVMQVRQG VAKGLGHAIM
CAYPLVGDEP VAVILPDVIL DEYSSDLKKD NLHEMLQRFE QTGISQIMVE PVPHKDVGNY
GVADCKGYEL QPGESAPMVS VVEKPSPDEA PSNLAIVGRY VLSADIWPLL SKTPPGAGGE
IQLTDSIEML MQQETVEAYH LKGISHDCGN KLGYMQAFVE YGMRHAGLGQ EFTQWLKQLL
AADKK