| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2636 |
|---|
| Symbol | dacD |
|---|
| ID | 5605396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2900583 |
|---|
| End bp | 2901752 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640938175 |
|---|
| Product | D-alanyl-D-alanine carboxypeptidase |
|---|
| Protein accession | YP_001478865 |
|---|
| Protein GI | 157370876 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0765123 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGCGTT CAGTATTGGC GGTGATCACC GGAATTTTGC TGCCGTTGGC GGTACAGGCG
GCAGATGCGC CACTCAACTT TCCCCTTAAT ACCCCGCCGG CGATAGACGC CGCCTCTTAC
GTGCTGATGG ATTACACCAC TGGCCAGGTA CTGGCACAGG AAAATGCCGA TCAGAGGCGT
AATCCGGCCA GCCTGACCAA ACTGATGACC GGGTTGGTGA TTGATCACGC GCTCGATCAA
CACAAGATTG GTCTGGATGA CGTGGTGACG GTGGGTAAAG ATGCCTGGGC GCAGGGCAAT
CCGGTGTTCA AAGGCTCTTC GTTGATGTTC CTGAAGCCCG GTGACAGGGT CACGGTTCGC
GATCTCAGCC GCGGCATTAT CATTGACTCC GGCAACGACG CCTGCGTAGC CATGGCGGAC
TACGTGGCGG GCAGTCAGGC CGCATTCGTC AAACTGATGA ATGAAAAGAG CGCCCAGCTT
GGCCTGCAAA ACACCCATTT TGAAACCGTC CACGGTCTGG ATGCCCCAGG GCAATTCACC
ACGGCGGGCG ATCTGGCGGT GATCTCCCGC GCCATTATTA TGAGCGAACC GGCGGAATAC
CATATGTACA GCGAGAAATC GCTGACCTGG AACGGTATCA CCCAGCAGAA CCGCAACGGG
CTGTTGTGGG ACAAAAACCT GCGGGTGGAC GGCCTGAAAA CCGGCCATAC CGAATCCGCC
GGTTTTAACA TTATTGCGTC TGCCACCGAA GGCGACCGTC GGCTGATTGC CGTAGTGATG
GGCGGTAAAA GTCCAAAAGG GCGCGAAGAA CAGGCGCGTA AACTGCTGAC CTGGGGGCTG
CGTGATTTCG TTACCCTACA TTTGTTTAGC GCTGGGCAAA GCCTGGGGCA GGAGAAAGTG
TGGTACGGCG ATCGCCATGA GGTTGCGGTG GGCAGCCAAC AGGATCAATA TCTCAGCCTG
CCGAAAAGCG AGGCGGATAA GCTGAAGGCG CAATATGTGA TCAATACGCC GCGTCTTGAT
GCTCCGCTGA CTCAGGGGCA GTCGGTCGGC GAAATTCGTA TCAGTGACAA TGGCAAAGTA
CTGAAAACCT TGCCGCTGGT GGTGTTGCAG CCGGTCAATC AGGGCGGCAT GTTCTCGCGC
CTGATGGACT ATGTGAAGTT GAAAATCTGA
|
|---|
| Protein sequence | MKRSVLAVIT GILLPLAVQA ADAPLNFPLN TPPAIDAASY VLMDYTTGQV LAQENADQRR
NPASLTKLMT GLVIDHALDQ HKIGLDDVVT VGKDAWAQGN PVFKGSSLMF LKPGDRVTVR
DLSRGIIIDS GNDACVAMAD YVAGSQAAFV KLMNEKSAQL GLQNTHFETV HGLDAPGQFT
TAGDLAVISR AIIMSEPAEY HMYSEKSLTW NGITQQNRNG LLWDKNLRVD GLKTGHTESA
GFNIIASATE GDRRLIAVVM GGKSPKGREE QARKLLTWGL RDFVTLHLFS AGQSLGQEKV
WYGDRHEVAV GSQQDQYLSL PKSEADKLKA QYVINTPRLD APLTQGQSVG EIRISDNGKV
LKTLPLVVLQ PVNQGGMFSR LMDYVKLKI
|
|---|
| |