Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2578 |
Symbol | |
ID | 5604523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 2834935 |
End bp | 2836101 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640938117 |
Product | sugar isomerase AgaS |
Protein accession | YP_001478807 |
Protein GI | 157370818 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2222] Predicted phosphosugar isomerases |
TIGRFAM ID | [TIGR02815] putative sugar isomerase, AgaS family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.962598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGTT ATTTTGCTTA CGATGCGGGC TGGCTGGAAC AACGACATGC GCTGCATACC GCACGTGAGA TCTGGCAGCA GCCGGACTTA TGGGCCGCCC TGCACCGGCA ATTGCAGGAG CAGCAAACGC TGTGGCAGCC TTTCCTTGCC CCGCTGCTGG CTAGCCCGCG CCTGCAGATT GTTCTGTGCG GCGCAGGTAG CTCAGCCTTT GCCGGTCGGG CATTGGCACC CTGGCTGCGC GAGAAAACCG GTCGCGACGT GGTGGCCTAC GGCACCACCG ATATTGTCGC CAACCCGCAC CAATATCTAG ACCTGACCCG CCCTACGCTG CTGGTGTCTT TCGCTCGCTC CGGCAACAGC CCGGAAAGCG TGGCAACGGT GGAGCTGGCC GATCAACTGC TGCCGGAAAG CTATCACCTG ATGCTGGTGT GCAATCCGGA CAGCCAGTTG GCGCAATATG CCCATCAACG CGATAACGTC TGTTCGCTGG TGATGCCACA GGGTTCCAAC GATCAAAGCT TTGCCATGAC CTCCAGCTTC AGCTGCATGA TGCTGTCCGC CGCGCTGTTG CTTGGCCCCT ATTCCCTTGC CGAGGCACAA CGGCCTCTGA CGGCCATGGT GGAGCGCTGC CGCGAACTGC GTGAAACCCT GCAACCGCAG GTGAAGGCGT TGGCTGCCAA CGGTTTCCGG CGTTACATCA CGCTGGGTGG CAGCTGTTTT ACCGGGCTGG CGGAAGAGGC TTCACTGAAG ATGCTGGAGC TGACGGCCGG ACAGATCGTT ACCCGCTACG ACTCGCCGCT CGGCCTGCGC CATGGCCCGA AGTTTATGGT CGACAACCAA ACCCTGGTCC TGCTGATGTT CTCCAGTGGC GACTATGCCC GCCAGTACGA TCGCGATCTG TGGAACGAGC TGCAACGCGA CGGCCTGGCG ATGCAGATGG TCGGCCTGAC CGGTAATACT CAGGCGCTGT GTGAACAAAT GCTGAACCTG CACCACGCCG AAGATGACGT CTGGTTGCTG TTCCCTTATC TGTTATTCAC CCAGATGCTG GCCTTTGAAA GTTCGCTGGC ACTTGGCCTG ACGCCGGATA ACCCATGCCC GACCGGAGAA GTTAACCGGG TGGTTAAAGG CGTTACTATT TACCGTTACC CGTCATCTGT GGCGTAA
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Protein sequence | MNGYFAYDAG WLEQRHALHT AREIWQQPDL WAALHRQLQE QQTLWQPFLA PLLASPRLQI VLCGAGSSAF AGRALAPWLR EKTGRDVVAY GTTDIVANPH QYLDLTRPTL LVSFARSGNS PESVATVELA DQLLPESYHL MLVCNPDSQL AQYAHQRDNV CSLVMPQGSN DQSFAMTSSF SCMMLSAALL LGPYSLAEAQ RPLTAMVERC RELRETLQPQ VKALAANGFR RYITLGGSCF TGLAEEASLK MLELTAGQIV TRYDSPLGLR HGPKFMVDNQ TLVLLMFSSG DYARQYDRDL WNELQRDGLA MQMVGLTGNT QALCEQMLNL HHAEDDVWLL FPYLLFTQML AFESSLALGL TPDNPCPTGE VNRVVKGVTI YRYPSSVA
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