Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2553 |
Symbol | |
ID | 5604348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 2808643 |
End bp | 2809803 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640938092 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001478782 |
Protein GI | 157370793 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGA TAACTCGCTT CAAGCTGTTG GCGCTGGCCG CCGCCGTTCT GGTCAGCCTG GGCGCGACAT CGCCGGTTCA GGCCGATGAA ACTATTTTGA TCGGGCTGGC AGGCCCGCTG ACCGGCCCTT CCGCCCGTAT CGGCAAAGAT TTGGAAAATG GCGCGCAGTT GGCCATCGCC GATGCCAACG CCCAGAAACC GACGCTGAAA GGCAAGCCGG TCACCTTTAA ACTGCTGTCC GAGGACGATC AGTCAGACCC ACGCACCGCC GTTGCGGTAG CCCAACGCCT GGTGGACGAA GGCGTTGCCG GCGTGGTCGG CCATTGGAAC ACCGGCACCA GCATCCCGGC GGCGCGTATT TACCACGACG CCGGGATTGC TCAGGTCGCA CCGGTCGCCA CTGGCCACGG CTATACTCAG CAAGGGTTCG ATACCAGCTT CCGCGTAATG GGCCACGACG ATGACGGCGG TCATTATGCC GGCGACTATG CGGTGAAGGT GCTGAAGGCC AAGCGTATTG CGGTAATCGA CGATCGCACC GCGTTCGGCC AGGGGCTGGC AGACGAGTTT ATCAAGTCGT TGGCGGCTCA GGGCCTGCAA CCGGTCGCGC GGGAGTATGT CGACGACAAG ACCGTTGATT TCAGTGCGGT ATTGACCACC GTGCGCAGCA AGAACGCCGA TTTGATCTTC TTCGGCGGCG TCGACTCGCA GGCCGCCCCG CTGGCCCGAC GCATCAAACA GTTGGGGATG AACACCCAAC TGATGGGCGC AGGTGGCTTT GTCAGCCAGA CTTTCCTGAC GCTGGCACAG AAAGAAGGTG AAGGCGTGGT GGCACTGGAG CCGGGCCTGC CGCTGGAACA GATGCCAGGC GGCAAAGCCT TTGAGCAGGC CTACCGTGAC CGCTACAAAA CCCATATCGA ACTGCATGCG CCCTTCGCCT ACGACGCTAC GCGGGTATTG ATTGCCGCCA TCGAGCAGGC GGGGTCCGCC GATCCGGCCG ATTATCTGCC GAAGCTGCGC GCCATCCATT ATCAGGGCGT CACAGGCACT ATTGCGTTCG ATGCACAGGG CAATCTGCAG CAGCCGAGTT TCACTCTTTA CCGGGTGGTT GACGGCAAAT GGCAGCCGCA AAGCGTACTG GGCGGCGCAA AAGCACAATA A
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Protein sequence | MSKITRFKLL ALAAAVLVSL GATSPVQADE TILIGLAGPL TGPSARIGKD LENGAQLAIA DANAQKPTLK GKPVTFKLLS EDDQSDPRTA VAVAQRLVDE GVAGVVGHWN TGTSIPAARI YHDAGIAQVA PVATGHGYTQ QGFDTSFRVM GHDDDGGHYA GDYAVKVLKA KRIAVIDDRT AFGQGLADEF IKSLAAQGLQ PVAREYVDDK TVDFSAVLTT VRSKNADLIF FGGVDSQAAP LARRIKQLGM NTQLMGAGGF VSQTFLTLAQ KEGEGVVALE PGLPLEQMPG GKAFEQAYRD RYKTHIELHA PFAYDATRVL IAAIEQAGSA DPADYLPKLR AIHYQGVTGT IAFDAQGNLQ QPSFTLYRVV DGKWQPQSVL GGAKAQ
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