Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_2518 |
Symbol | |
ID | 5603865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 2764041 |
End bp | 2765543 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640938057 |
Product | diguanylate cyclase |
Protein accession | YP_001478747 |
Protein GI | 157370758 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.784165 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCCA TCATGCAGGT CGAATTTTAT CCGTATTCTT CGCAAGCTTC TGGAAGCAAG ATGCACACCA CTGAGTTACC CGACGCCACT AAATTGCGCC TCGCGCTAAT CGTCTTTTTG CTGGTGTTCT GCACCTGCAT TTTGGGTATT GAAAGTCGTC CCATCGGTCT GTTAGCGCTA TTTTGGCCAA CCAATGCGGT ACTTTTGGCC GTGCTGGTAC GCTACCCGGC CATGGGCAGT CCTGTTGGCT GGTTGATGGC GATGTCAGGC TATTTGGCGG CGGATCTGAT CACCGGCAGC CCTCTGGGCA AAGCCATACT GCTCAATGGT GCCAATATTG CCGGTGTGGC GGTCGGGTTT TATCTGTTTA TGCGTTTATC GCCGCAGGTC AGAACCCTGG AACGCACCTC ATCGAGCATT TATCTGTTCG CTATCTGTCT GGCGAGCGCG ACAGCTACGG CGTTACTTGG TGCCGGGGCT TCGGTGCTGC TGTTTGGCCG CCAGTATCTG CCTTCATTGG CGTTGTGGCT GTCTTCGGAA TTTACCAACT ACATCACGCT GATGCCGTTT ATTCTGGCTT TTCCGCGGGA CTGGAAAGGT TATCTTCGCA GCATTTTCCA GGCCGTGACC CTGCGCAGCC AGTGGCCCAA TACCGTCAGA AAAATCGCGG TGTTACTTCT GCTGCTGTTG GCCTGCTTCG GTAGCATCCT GATTGGTGGC CCCGGAGCGG TGATTTTCCC GATGCCGATC CTGCTATGGT TGGCGATGTC GTTCTCGCTG TTCAGCACAA TGATCGCGGT ATTGGTTTAT GTGTTGTGGT GCCACCTGGC GATCGATCTG GGCCTGATTA CCACTAACCT TGATATGAAA ATGCTGCAAA ACACGGTGTC GATGCGACTT GGCGTGGCGT TACTGGCGCT GGGACCTATT GCCGTGGCCA GCATGAATTT TGCTCGCAAT GCGCTGCTGC AAAGGCTTGA GCACGTGGCG AATCATGATG CTCTGACCCA TGTATTGACC CGCAGCGCTT TTATGCAGCG CGGAACGCGG CTGGTCAGCC AAAAGGGCGA GCGGATCTGC ATCATGATGC TGGATATCGA CTACTTTAAA TCGATCAATG ACCGCTTTGG GCACGCCGGC GGCGATGCGG CGCTGCTGTC CTTTACCCGC GCCATTACTG GCGATCTGCG CGATAACGAT TTGTTTGGTC GCATGGGGGG TGAAGAATTT GCGATTGTCG CACCCATTGC GCAACAGCAG GATGCGCTAT CGCTGGCCGA ACGTCTGCGT CACCGAGTTG AAATTGAATC CATCAACATG CCCGCAGGCG CTGCTTTACA GATCACCGTC AGCATCGGTA TGGTCACCTG CATCGGCGGT TCAGGACAAA ATCTGGACAA CCTGCTGAAA ATCGCCGATT TGGCGGTCTA TAAAGCCAAA AATAGCGGCC GTAACCGGGT CGCCACGCCA GAACTCCTGC CGCACCATTC CACCGAGATC TAA
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Protein sequence | MAAIMQVEFY PYSSQASGSK MHTTELPDAT KLRLALIVFL LVFCTCILGI ESRPIGLLAL FWPTNAVLLA VLVRYPAMGS PVGWLMAMSG YLAADLITGS PLGKAILLNG ANIAGVAVGF YLFMRLSPQV RTLERTSSSI YLFAICLASA TATALLGAGA SVLLFGRQYL PSLALWLSSE FTNYITLMPF ILAFPRDWKG YLRSIFQAVT LRSQWPNTVR KIAVLLLLLL ACFGSILIGG PGAVIFPMPI LLWLAMSFSL FSTMIAVLVY VLWCHLAIDL GLITTNLDMK MLQNTVSMRL GVALLALGPI AVASMNFARN ALLQRLEHVA NHDALTHVLT RSAFMQRGTR LVSQKGERIC IMMLDIDYFK SINDRFGHAG GDAALLSFTR AITGDLRDND LFGRMGGEEF AIVAPIAQQQ DALSLAERLR HRVEIESINM PAGAALQITV SIGMVTCIGG SGQNLDNLLK IADLAVYKAK NSGRNRVATP ELLPHHSTEI
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