| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2514 |
|---|
| Symbol | |
|---|
| ID | 5603789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 2760714 |
|---|
| End bp | 2761547 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640938053 |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_001478743 |
|---|
| Protein GI | 157370754 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAA TCACCGACGG CGAAGAAATC ACCGCGCCTG ATAGTTTAGT GTCCGCCGCC
AGCGGCGATC CCTTTAAGGG CGACCCCAAT TTTATGGCCT CGCTGGCCCG CGGCCTTGAG
GTGATCCAGG CTTTTACTCC GCAGCGTCGT CTGATGTCGA TTTCACAAAT CAGCCAGAAA
ACCGGCATTC CACGCGCTGC GGTGCGTCGT TGCCTGTATA CCCTGAACAA GCTGGGGTTT
GTTTACGCGC AGGACGGCAA AAACTTTGAG CTGCGCCCAC GGATCCTGAC GCTGGCCCAT
GCCTATCTCG GTGCCACGCC GCTGGCGAAA GCCACCCAGC CGGTTCTGAA ACACATCAGC
CAGTTGTTGA ATGAGTCCTG TTCTATCGCC ACGCTGGACG GCGACAATAT TTTGTATATC
GCCCGTGCCT CTGCCGAACG CATCATGACC ATAGATCTGA ACATCGGCAG CCGCCTGCCG
GCCTTCGCCA CCTCTATGGG CCGGGTGCTG TTGAGCCATT TGCCGATTGA TAAGCGTGAG
GATTACCTGC AACGCATCAC CCTGACGCGC TATACGCAAT ACACCCTGAG TTCGATTGAT
AAACTGCGTG AAGAACTGGA TAAGGTTCGC GCTCAGGGTT ACGCGATTAA CGATCAGGAG
TTGGAAATCG GTCTGCGATC CATCGCGGTA CCGATTACCT CGGTCAACGG CGGCGTCACT
GCCGCGTTAA ACGTTGGGGT GCAGGCCGGC CATGTCCCGC TGAGCGAACT GACCGAACGT
ATCCTGCCGA TCCTGCTCGA AGGCTCACAG GAACTTTCGC TACTAAACCA CTAA
|
|---|
| Protein sequence | MTKITDGEEI TAPDSLVSAA SGDPFKGDPN FMASLARGLE VIQAFTPQRR LMSISQISQK
TGIPRAAVRR CLYTLNKLGF VYAQDGKNFE LRPRILTLAH AYLGATPLAK ATQPVLKHIS
QLLNESCSIA TLDGDNILYI ARASAERIMT IDLNIGSRLP AFATSMGRVL LSHLPIDKRE
DYLQRITLTR YTQYTLSSID KLREELDKVR AQGYAINDQE LEIGLRSIAV PITSVNGGVT
AALNVGVQAG HVPLSELTER ILPILLEGSQ ELSLLNH
|
|---|
| |