Gene Spro_2281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2281 
Symbol 
ID5604837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2484073 
End bp2485338 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content59% 
IMG OID640937820 
Productmajor facilitator transporter 
Protein accessionYP_001478510 
Protein GI157370521 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0316528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCGA CGCTGGCCGC CAACGACGAT GCGGCTGCTG CGCCAAAAAC CCGACGCTCC 
ACCCTTAACA AACTTCCCTA CATCGAACGC GGAACGCCGC AGTTTATGCG CGTTACTTTG
GCGTTGTTTT CCGCCGGCCT GGCCACTTTC GCCTTGCTGT ATTGCGTGCA GCCGATCCTG
CCGGTTCTGT CGCAGGACTT TGGCATCTCC CCGGCGGAAA GCAGCCTGTC GCTATCGGTT
TCCACCGGGC TATTGGCGAT CGGCCTGATG TTTACCGGCC CGCTGTCCGA CGCCATCGGC
CGTAAATCAG TGATGGTGGT GGCGCTGCTG CTGGCGGCTA TTTGCACCCT GATTTGCGCC
TTTATGACCA GTTGGCATGG CATTCTGCTG ATGCGCGCGC TGATAGGCCT TTCACTTAGT
GGCGTCGCCG CCGTTGGCAT GACCTACCTG AGCGAAGAGA TCCATCCCAG CTTTGTCGCT
TTTTCGATGG GGCTGTATAT CAGCGGTAAC TCCATCGGCG GCATGAGCGG CCGCCTGGTG
ACGGGGGTAC TGACCGACTT CTTCTCCTGG CGGGTATCGC TGGCGGTGAT CGGCCTGTTC
GCGCTGGCCG CGGCCTGCAT GTTTTGGCGT ATTTTGCCCG AATCAAAACA TTTTCGGGCC
AGTTCGCTGC GCCCGCGCAC TCTGCTTATT AACTTCCGCC TGCATTGGCA TGACAAAGGC
TTACCACTGC TGTTTGCCGA AGGTTTTCTG CTGATGGGCA GTTTTGTCAC CATGTTCAAC
TATATTGGCT ACCGCCTGCT GTCGGATCCT TATCACCTCA GCCAGGCGAT AGTGGGCTTA
CTGTCGGTGG TGTATCTGAC CGGTTCCTAC AGTTCGCCGA AGGCCGGAGC CATGACCTCC
CGATTTGGCC GTGGGCCGGT GCTGTTGGCG TCGACACTGA TTATGCTGAT CGGGATCCTG
ATTACCGCGC TGGCTCCGGT AGCGGCTATT TTCATCGGCA TGATGCTGTT CACCGCCGGT
TTCTTTGCTG CCCATTCGGT TGCCAGCAGT TGGATTGGTC GCCGCGCGCG CCGCGCCAAG
GGCCAGGCAT CTTCACTTTA CCTGTTCTGT TATTACGTGG GTTCCAGCGT CGCCGGTACC
CTCGGCGGCG TGTTCTGGCA CAGTTTCGGC TGGAATGGCG TGGTGGCCTT TATCAGCGTG
ATGCTGTTGT TGGCCCTGTT GGTCGTGCAT TACCTGAAGA AATTGCCGGA AGCGGCCCGC
GTTTAA
 
Protein sequence
MPSTLAANDD AAAAPKTRRS TLNKLPYIER GTPQFMRVTL ALFSAGLATF ALLYCVQPIL 
PVLSQDFGIS PAESSLSLSV STGLLAIGLM FTGPLSDAIG RKSVMVVALL LAAICTLICA
FMTSWHGILL MRALIGLSLS GVAAVGMTYL SEEIHPSFVA FSMGLYISGN SIGGMSGRLV
TGVLTDFFSW RVSLAVIGLF ALAAACMFWR ILPESKHFRA SSLRPRTLLI NFRLHWHDKG
LPLLFAEGFL LMGSFVTMFN YIGYRLLSDP YHLSQAIVGL LSVVYLTGSY SSPKAGAMTS
RFGRGPVLLA STLIMLIGIL ITALAPVAAI FIGMMLFTAG FFAAHSVASS WIGRRARRAK
GQASSLYLFC YYVGSSVAGT LGGVFWHSFG WNGVVAFISV MLLLALLVVH YLKKLPEAAR
V