| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2279 |
|---|
| Symbol | fumC |
|---|
| ID | 5604841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 2481484 |
|---|
| End bp | 2482881 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640937818 |
|---|
| Product | fumarate hydratase |
|---|
| Protein accession | YP_001478508 |
|---|
| Protein GI | 157370519 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0114] Fumarase |
|---|
| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.108005 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCCG TTCGTATTGA AAAAGACTCT ATGGGCCCGA TTGAAGTGTC GGCCGATCGG
CTATGGGGGG CGCAAACTCA GCGTTCTCTG GAGCACTTCC GTATTTCTTC TGAAAAGATG
CCGACCGCCT TGATCCATGC GCTGGCGTTG ACCAAACGCG CGGCGGCCAG CGTGAATATG
GACCTGGGTT TACTGCCTGC CGAGCGTGCC AATGCCATTA TCAGCGCCGC CGATGAAGTG
CTGGCGGATC AACATGCCAA TGAATTCCCC TTGTCGATTT GGCAAACCGG CTCCGGCACC
CAGACCAACA TGAATATGAA TGAAGTGTTG GCCAACCGTG CCAGTGAGCT GTTGGGCGGG
GTCCGTGGCG AAGAGCGTCG AGTGCATCCG AACGACGACG TCAACAAGAG CCAGAGTTCC
AATGACGTGT TCCCAACCGC GATGCACGTG GCCGCGGTGA TCGCGGTGCG TGAGCACCTG
ATCCCCGAAC TGAAAGTGCT GCATAAAACC CTGAGCGACA AGGCAGAGGC CTACCGCGAT
ATCGTCAAAA TTGGCCGTAC CCATTTGCAG GATGCGACCC CGCTGACCCT CGGCCAGGAG
ATTTCCGGCT GGGCAGCCAT GCTGGCGCAT AATCTGCAGC ACATTGAAGC CAGTATCCCG
CATATCAGTG AGCTGGCGTT GGGCGGTACC GCCGTGGGTA CCGGTTTGAA TACCCATCCG
GAATACGCGG TTCGCGTTGC CAAGGCGCTG GCTGACCTGA CCGGGCAGCC GTTCGTTACC
GCACCCAACA AATTTGAAGC GCTGGCCACC TGCGATGCGT TGGTACACGG CCACGGCGCG
CTGAAAGGGC TGGCGGCTTC GCTGATGAAA ATTGCCAACG ATGTACGCTG GTTATCCTCC
GGCCCGCGTT GCGGTATCGG GGAAATTTCG ATTCCGGAAA ACGAACCGGG TAGTTCCATC
ATGCCGGGCA AGGTCAACCC AACCCAGTGC GAAGCGATGA CCATGCTGTG CGCACAGGTG
CTGGGCAACG ACGTAGCGGT GAATATCGGC GGTGCTTCCG GCAACTTTGA GTTAAACGTG
TTCCGACCTA TGGTGATCCA CAACTATTTG CAATCCATTC GCCTGCTGGC CGACGGTATG
CAGGGCTTTA ATGAGCACTG TGCGGTGGGT ATCGAACCTA ACCGTGACCG TATCAGCCAG
TTGCTGAATG AGTCACTGAT GCTGGTGACC GCGCTCAATA CCCATATTGG TTATGACAAA
GCGGCAGAAA TCGCCAAGAA AGCGCACAAG GAAGGCCTGA CGCTGAAAGC CTCGGCGCTG
AAACTGGGCT ACCTGACCGA AGAGGAATTC GACCTGTGGG TGCGCCCGGA AGATATGGTC
GGCAGCATGA AGAAGTAA
|
|---|
| Protein sequence | MAAVRIEKDS MGPIEVSADR LWGAQTQRSL EHFRISSEKM PTALIHALAL TKRAAASVNM
DLGLLPAERA NAIISAADEV LADQHANEFP LSIWQTGSGT QTNMNMNEVL ANRASELLGG
VRGEERRVHP NDDVNKSQSS NDVFPTAMHV AAVIAVREHL IPELKVLHKT LSDKAEAYRD
IVKIGRTHLQ DATPLTLGQE ISGWAAMLAH NLQHIEASIP HISELALGGT AVGTGLNTHP
EYAVRVAKAL ADLTGQPFVT APNKFEALAT CDALVHGHGA LKGLAASLMK IANDVRWLSS
GPRCGIGEIS IPENEPGSSI MPGKVNPTQC EAMTMLCAQV LGNDVAVNIG GASGNFELNV
FRPMVIHNYL QSIRLLADGM QGFNEHCAVG IEPNRDRISQ LLNESLMLVT ALNTHIGYDK
AAEIAKKAHK EGLTLKASAL KLGYLTEEEF DLWVRPEDMV GSMKK
|
|---|
| |