Gene Spro_2264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2264 
Symbol 
ID5604937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2464528 
End bp2465814 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content46% 
IMG OID640937803 
Productintegrase family protein 
Protein accessionYP_001478493 
Protein GI157370504 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.12232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00139292 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGCTT ATCCAACGGG GGTGGAAAAT CATGGAGGAA CGCTCCGGAT CTGGTTCCTC 
TTCCAGGGGA AGAGAGTCCG GGAAAACCTT GGTATACCAG ACACGCCAAA AAACAGGAAA
GCTGCTGGAG AATTGCGAAC CTCTGTTTGT TATGAAATAA AAACTGGCAA CTTTTCATAC
GAAAAGAGGT TCCCAAACTC ACGCAACGTT ACAATCAACG CAGCGCGTGA AAACATAACG
GTAAATGACA TCATTAAAAA ATGGTTAAAT CTGAAGGAAA TGGAGGTATC CAAAGGCACA
TTGTATAGAT ATACATCACA TTGCGGGGTT ACCGCGTCAT ACCTAAATCC AGAAAGAAAA
ATTAATGAAA TCAGGCAAGA GGACATTCTA CTCGCCAGAA AGAGAATGCT TACTGAACCT
CAACAACCGA AGATACACGA AAAGCGAAAA TCCGTGCGTC AGGGAAGAGC GGTTCCAACT
GTTAACTCTT ACATGTTTTG CATGAGGGCA ATTTTTGATT TTGCAGTCTC TAATGGGTAT
ATCGCTAACA ACCCATTTGA AGGGGTGTCA CCACTCAAAA AACAGCGCCC CGCTCCGGAC
CCACTCACTA AGGAAGAGTA CCAGCGCGTC ATTGTCAGCT GCCCTACCCA GCAGATGAGA
AACATGATAA CGCTGGCCAT TAATACCGGT CTACGCCATG GGGAGCTTTA TGCTTTAGCA
TGGGAAGACT TGGACACTCA GAATTGGACA ATCAGTATTA GCAGAAACCT CTCTCTAAAA
GAGCATTTTA CTCTGCCAAA AACTGATGCT GGCATGAGGA CGATCCAGCT TACAACTGTC
GCCATAGAGG CCATCAAGTC TCAAATGGCA CTGACAAGGT TGTCGAATGC TCACCGCGTG
ACAGTAAACC TGCGAGAGTA TGGGAAAAAG AGGACAGATG ACTGCACGTT CATTTTTTCC
CCCCGGATAA CATCCAGGAA CGGTTCTAGC GCGGATTGGT ACAGTCCGGG CGCGTTCAAT
GGTGCTTGGA AAACCATTTT GCGCAAGGCC GGTGTAAAGC ACAGGAAATC TTACGAGACG
AGACACACGT TTGCCTGCTG GGCGTTATCG TGTGGCGCTA ACCCAAATTT CGTTGCACAC
CAGATGGGGC ATTCATCAGC ACAAATGCTC TACAATGTCT ATGGAAAATG GATGACAGAG
AATAACGACC ACCAGGTGAA CATTTTAAAT GCCAGTTTTT CACAGAATGC CCCACAGGTG
CCCCATGAGC AAATCATAAA CATCTAA
 
Protein sequence
MKAYPTGVEN HGGTLRIWFL FQGKRVRENL GIPDTPKNRK AAGELRTSVC YEIKTGNFSY 
EKRFPNSRNV TINAARENIT VNDIIKKWLN LKEMEVSKGT LYRYTSHCGV TASYLNPERK
INEIRQEDIL LARKRMLTEP QQPKIHEKRK SVRQGRAVPT VNSYMFCMRA IFDFAVSNGY
IANNPFEGVS PLKKQRPAPD PLTKEEYQRV IVSCPTQQMR NMITLAINTG LRHGELYALA
WEDLDTQNWT ISISRNLSLK EHFTLPKTDA GMRTIQLTTV AIEAIKSQMA LTRLSNAHRV
TVNLREYGKK RTDDCTFIFS PRITSRNGSS ADWYSPGAFN GAWKTILRKA GVKHRKSYET
RHTFACWALS CGANPNFVAH QMGHSSAQML YNVYGKWMTE NNDHQVNILN ASFSQNAPQV
PHEQIINI