Gene Spro_2263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2263 
Symbol 
ID5604936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2463056 
End bp2464480 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content59% 
IMG OID640937802 
ProductPTS system, maltose and glucose-specific IIBC subunit 
Protein accessionYP_001478492 
Protein GI157370503 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components 
TIGRFAM ID[TIGR00826] PTS system, glucose-like IIB component
[TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component
[TIGR02004] PTS system, maltose and glucose-specific IIBC component 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0839727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000457732 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAAGA TCGGCTCCTT TGCCTTTAGC TTCCTGCCGG TGATGTTCGC CATCGCCATT 
CCATTGGGCA TGGCGCGTGA AAACAAAGGG GTCGCCGCGT TCTCCGGCTT TGTCGGCTTC
GCGGTGCTGA ACCTGGCCAC CAACTTCTAT CTGACCACCA CCGGCATTTT GCCCACCACC
GATCCGCTGG TGCTGAAAGC CAACAACATC CAAAACATTC TCGGGATCCA GTCGATTGAT
ACCGGCATTC TGGGTGCGGT GATCGTCGGG ATTATCGTTT ATCAATTGCA TGAGCGTTTC
CACAACATTC GCCTGCCGGA TGCGCTGGCA TTTTTCGGCG GCACCCGTTT TGTGCCGATC
GTCACTACCC TGGTTCTGGG TCTGTGTGGT CTGGTGATCC CGCTGATCTG GCCGTGGTTC
GCCGCCGGCA TTACCGGTCT GGGCTGGGTG ATCAACAGCG CCGGTGCCTT TGGCCCGATG
CTGTTTGGCA CCGGTGAACG TCTGCTGTTA CCGTTCGGGC TGCAACATAT TCTGGTGGCG
CTGATCCGCT TTACCGAAGC GGGCGGCACG CTGGACGTCT GCGGCCATAG CGTGAGCGGC
GCGCTGACCA TTTTCCAGGC GCAACTCTCT TGCCCGACCA CCACCGGCTT TGCTGAAAGC
GCCACCCGCT TCCTGTCCCA GGGCAAAATG CCGGCCTTCC TCGGCGGTCT GCCTGGGGCG
GCGCTGGCGA TGTACCACTG CGCCAAGCCG GAAAACCGCC ATAAAATTAA GGGCCTGCTG
ATCTCCGGCG TAGTAGCCTG CGTGGTCGGT GGCACCACCG AACCGATCGA GTTCCTGTTC
CTGTTTGTCG CGCCTTTCCT CTACCTCATT CACGCCGTCC TGACCGGGCT GGGCTTCACC
GTGATGGCGC TGCTGGGCGT GACCATCGGC AATACCAACG GTAATATCAT CGACTTCGTG
GTGTTCGGCA TTCTGCATGG CACCGCCACC AAGTGGTATC TGGTGCCCGT CGTCGCAGCC
ATTTGGTTCG CTGCCTACTA CGCCATTTTC CGTTTCTCCA TTCAGCGCTT TAATATCAAA
ACGCCGGGCC GCGAGAGCGA AACCACCGCC AGCCAGAGCG CATCTGCAGG CCCGGTCGGC
AAATCCGGCT ATAACGTACC GGCCATTTTG GCGGCGCTGG GCGGCAGTGA GAATATTGTT
TCGCTGGATA ACTGCATTAC CCGTCTGCGC CTGTCGGTCG ACGACATGAG CAAGGTGGAT
GACGCCGCGC TGAAGGCCAA TCGCGCCATC GGCGTGGTGC CTCTCAACGA GCACAATCTG
CAGGTGGTGA TCGGCCCGCA GGTGCAATCG GTGAAAGATG AATTAGACTC ACTGATAGCG
GCAGCGCCTC CTGCTGCGGC CCTGCAGGGA GCGTCAAATG TTTGA
 
Protein sequence
MSKIGSFAFS FLPVMFAIAI PLGMARENKG VAAFSGFVGF AVLNLATNFY LTTTGILPTT 
DPLVLKANNI QNILGIQSID TGILGAVIVG IIVYQLHERF HNIRLPDALA FFGGTRFVPI
VTTLVLGLCG LVIPLIWPWF AAGITGLGWV INSAGAFGPM LFGTGERLLL PFGLQHILVA
LIRFTEAGGT LDVCGHSVSG ALTIFQAQLS CPTTTGFAES ATRFLSQGKM PAFLGGLPGA
ALAMYHCAKP ENRHKIKGLL ISGVVACVVG GTTEPIEFLF LFVAPFLYLI HAVLTGLGFT
VMALLGVTIG NTNGNIIDFV VFGILHGTAT KWYLVPVVAA IWFAAYYAIF RFSIQRFNIK
TPGRESETTA SQSASAGPVG KSGYNVPAIL AALGGSENIV SLDNCITRLR LSVDDMSKVD
DAALKANRAI GVVPLNEHNL QVVIGPQVQS VKDELDSLIA AAPPAAALQG ASNV