| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2237 |
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| Symbol | rnfD |
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| ID | 5605169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 2436671 |
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| End bp | 2437756 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640937776 |
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| Product | electron transport complex protein RnfD |
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| Protein accession | YP_001478466 |
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| Protein GI | 157370477 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
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| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000430242 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGTTCA GGCCGGTACA ACCCACAGCC AGCAAAGGCT TGCACATCGC CAGTTCCCCC
TTCACCCATA ACCAGCAAAG CACCAGCCGT ATCATGCTGT GGGTGATGTT GGCCTGCATT
CCCGGGATCG CTGCGCAGGT ATGGTTTTTT GGCTATGGCA CGCTGATCCA GACCGCACTG
GCGATGATCG TCGCCCTGCT GGCGGAAGGG ATCATCCTTT CTCTGCGCAA ATTGCCGGTG
CGCACCCGGC TGGCGGATAA CTCGGCCCTG CTGACCGCCC TGTTGCTCGG CATCAGTCTG
CCGCCACTGG CCCCCTGGTG GATGATTGTC ATCGGCACCT TCTTCGCCAT CGTTATTGCC
AAACAGCTGT ATGGCGGCCT CGGGCAGAAT CCGTTCAATC CGGCCATGGT CGGTTATGTG
GTGTTGCTGA TCGCCTTCCC GGTTCAGATG ACCAGTTGGT TACCGCCGGA TGAACTGCGG
GCTACCGCGC TGTCGTTCCA GGATACCCTG TTGGCTATTT TCAGCGGCCA CACGACGCAG
GGCGCCACCA TCCATGAACT GCAAATGGGT ATTGACGGCA TCAGCCAGGC CACCCCGCTC
GACGGTTTCA AAACCGGCCT GCGCAGCGGT CATAGCGTTG AGCAGGTGCT GCAACAGCCG
CTGTTCGGTG GCACATTGGC CGGTATCGGC TGGCAATGGG TTAATCTCGG TTTCCTGGCC
GGTGGCCTGT TTATGCTGGG TCGTCGTCTG ATCCACTGGC AAATCCCCTT CAGCATGCTG
GCGGCCATCG CCCTGTGTTC CGGTTTGGCC TGGTGGCTTG ACCCGGCGCA GCAGGCCTCG
CCGCTGATCC ACCTGTTCTC CGGTGCCAGC ATGCTGGGCG CATTCTTTAT TGCTACCGAT
CCGGTCAGTG CCTCCACCAC GCCGAAAGGC CGCCTGATTT ACGGCGCATT GGTGGGCGTG
CTGGTGTGGC TAATTCGCGT TTACGGCGGT TATCCGGACG GCGTAGCCTT TGCGGTGTTG
CTGGCCAACA TTACTGTCCC ACTGATCGAC CACTACACGC AGCCGCGCGT GTACGGTCAC
CGCTAA
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| Protein sequence | MKFRPVQPTA SKGLHIASSP FTHNQQSTSR IMLWVMLACI PGIAAQVWFF GYGTLIQTAL
AMIVALLAEG IILSLRKLPV RTRLADNSAL LTALLLGISL PPLAPWWMIV IGTFFAIVIA
KQLYGGLGQN PFNPAMVGYV VLLIAFPVQM TSWLPPDELR ATALSFQDTL LAIFSGHTTQ
GATIHELQMG IDGISQATPL DGFKTGLRSG HSVEQVLQQP LFGGTLAGIG WQWVNLGFLA
GGLFMLGRRL IHWQIPFSML AAIALCSGLA WWLDPAQQAS PLIHLFSGAS MLGAFFIATD
PVSASTTPKG RLIYGALVGV LVWLIRVYGG YPDGVAFAVL LANITVPLID HYTQPRVYGH
R
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