Gene Spro_2197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2197 
Symbol 
ID5605513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2399503 
End bp2400324 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content50% 
IMG OID640937736 
ProductNLP/P60 protein 
Protein accessionYP_001478426 
Protein GI157370437 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.369734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000685507 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTTTAA TTCTTACGCT TTTTGTGCTG TTGTTTACAC AGCTATTCTT TAATCTGGCG 
CATGCAGCGC CACAGGCACG TGTTGCCGCT GAGCAGCGCA AGAGCCACGT AAACGAAGCC
CGGCCGGATG ACCGCAAGAA AAAGAAAGCG GTTAAGGCCA GCAGCAAAAA AGTAAAAGTC
ACTACTCCGC AGAAAACCGC CAAGGTCTCC AAAGCCAAAA CAGAAAAAAC CGCTAAAAAG
ATCGTTAGCG CAAAATCAAA AAACAAAACT CATAAAATAG CCAAAATTAA AGTGACCCCA
CCGAAGAAGG GCTATAAAAA AGGCTATGGG CGCCATCGTG AAACCGGTAT GGCAACCGCC
AAATTGGTGG CTGACGAAAA ACCACTGAAG CTCAGCCCTG CGCACAAAAA ACGCTACCAG
CATGCCAAGC AAACCGCGAT GGCCAAGCTG ATGGATCAAA TGGGTAAACC TTATCGCTGG
GGTGGCTCCT CGCCAAGAAC CGGCTTTGAC TGTAGCGGTC TGATTTATTA CGCCTATAAA
GACATCGTTA AAATTAAAAT GCCGCGTACC GCCAACGAGA TGTATCACCT GCGTGACGCA
GCGCCGATCA AGAAGAGTGA GCTGGAAAGC GGCGATCTGG TGTTCTTCCG CATTAACAAC
CGCGGCGTGG CAGACCATGT TGGGGTTTAT TTGGGTAACG GCAAATTCAT TCAGTCCCCG
CGTACCGGCG AAGAAATCCG CATCAGCCAG CTCGATAACG ACTACTGGCA AAACCACTAC
ATCGGCGCAC GCCGGGTAGT CACGCCAAAA ACCATTCGAT AA
 
Protein sequence
MRLILTLFVL LFTQLFFNLA HAAPQARVAA EQRKSHVNEA RPDDRKKKKA VKASSKKVKV 
TTPQKTAKVS KAKTEKTAKK IVSAKSKNKT HKIAKIKVTP PKKGYKKGYG RHRETGMATA
KLVADEKPLK LSPAHKKRYQ HAKQTAMAKL MDQMGKPYRW GGSSPRTGFD CSGLIYYAYK
DIVKIKMPRT ANEMYHLRDA APIKKSELES GDLVFFRINN RGVADHVGVY LGNGKFIQSP
RTGEEIRISQ LDNDYWQNHY IGARRVVTPK TIR