Gene Spro_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2139 
Symbol 
ID5606025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2334971 
End bp2336254 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content56% 
IMG OID640937675 
Productserine transporter 
Protein accessionYP_001478368 
Protein GI157370379 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00814] serine transporter 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.41295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.95428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGA TTTCTCCCGA TTCAGGCACG CTGGCTTCCG CCCAGCCGGG CAAATGGAAC 
AAGACGGACA CCGTCTGGAT GTTTGGTCTC TACGCCACTG CGGTGGGGGC AGGTACGTTG
TTTCTGCCGA TCAATGCCGG CTTAAACGGC CCACTGGTGC TGTTGCTGAT GGCCGTGTTT
GCCTTCCCTC TGACTTATTT ACCGCATCGC GCACTGAGCC GCTTTGTGCT TTCCGGCTCC
AGCCGTGACG GCAATATCCA TGATGTGGTG GTTGAGCACT TTGGCGTGCT GGCCGGTAAA
ATCATCATGG TGCTGTACCT GATGGCGTTC TTCCCGATCG TGCTGGTGTA CAGCATTTCG
ATCACCAACG CGCTGGACAG TTTCCTGACT CATCAGTTTC ACCTGACGCC GCTACCGCGT
ATCTGGCTGA GCCTGGCGGT GGTAGTGGTG CTGAACCTGG TGCTGCTGCG CGGTAAAGAC
GCCATTGTTT CGGCGATGGG TATGCTGGTA TTCCCGTTGC TGGTATTTTT GATGGGTATT
TCGCTGTACC TGATGCCGAC CTGGCAAACC GCCAACTTTG TCAGTGGCCT GGCCAACACT
CAGTTCAGTA GCCCGGACCT GTGGCATTCG TTGTGGCTGG CGGTGCCGGT GATGGTGTTT
TCCTTTAGCC ATGCGCCGAT TATTTCGTCC TTCGCTTCGA CCCAAAAGAG CCTGTATGGC
GAACTGGCTG AACGCCGCTG CGCGCGAATT ATGCGCTACA GCTACGTGCT GATCTGCGTC
ACCGTATTGT TCTTTGTTTT CAGCTGCGTG CTGAGCCTGT CCCACGAGGA TATGCAGCAG
GCGAAAGATC AAAACATTAC CGTGCTGACC ACGCTGGCGA ACAAATTTTC CAACCCGTTG
ATCGCTTATT TGGGGCCGAT GATGGCGATG CTGGCAATGG CCAAGTCCTA TCTGGGCACC
TCATTGGGGG TGACCGAAGG AGCGACCAGC CTGATTGACG GCCTGACGCG CGCGGTCGGT
AAACCGCTAA GCTCACGTAT TACACACCGT ATTTCTGCCG TGTTGCTGTT CCTGCTGACC
TGGGCGGCGA CGGTCTGGAA CCCGAGTGCG TTGCATATTA TTGAAACCAT CAGCGGCCCG
CTGATCGCGG CAATCCTGTT TATTTTGCCG ATGTATGCGG TGCGTAGGGT ACCCGCCATG
CGTCGTTACC GTGCGCTGAG CAATGTATTT GTGCTGGTGA TGGGGCTGAT TGCGCTGTCG
GCGCTGATTT ACGGCCTGAT TTAA
 
Protein sequence
MSTISPDSGT LASAQPGKWN KTDTVWMFGL YATAVGAGTL FLPINAGLNG PLVLLLMAVF 
AFPLTYLPHR ALSRFVLSGS SRDGNIHDVV VEHFGVLAGK IIMVLYLMAF FPIVLVYSIS
ITNALDSFLT HQFHLTPLPR IWLSLAVVVV LNLVLLRGKD AIVSAMGMLV FPLLVFLMGI
SLYLMPTWQT ANFVSGLANT QFSSPDLWHS LWLAVPVMVF SFSHAPIISS FASTQKSLYG
ELAERRCARI MRYSYVLICV TVLFFVFSCV LSLSHEDMQQ AKDQNITVLT TLANKFSNPL
IAYLGPMMAM LAMAKSYLGT SLGVTEGATS LIDGLTRAVG KPLSSRITHR ISAVLLFLLT
WAATVWNPSA LHIIETISGP LIAAILFILP MYAVRRVPAM RRYRALSNVF VLVMGLIALS
ALIYGLI