| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2002 |
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| Symbol | lolD |
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| ID | 5603663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 2192994 |
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| End bp | 2193698 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640937540 |
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| Product | lipoprotein transporter ATP-binding subunit |
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| Protein accession | YP_001478233 |
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| Protein GI | 157370244 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.286552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0212812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAACC ATCTTTTGTT GCAGTGCGAC AACCTGTGCA AGACTTATCA GGAAGGCAAC
CTGCATACCG ACGTACTGCG TAATGTAAGC TTTGCCATGC AGCCGGGCGA GATGATGGCG
ATTGTCGGCA GTTCTGGCTC CGGTAAAAGT ACTCTGTTGC ACCTGTTGGG TGGGCTGGAT
TCACCGACCT CCGGCGAGGT TGTCTACAAG GGGCAGTCGC TGAATACGTT GTCCTCGGCG
GCCAAGGCCG AACTGCGCAA CCGCCAGCTT GGTTTTATCT ACCAGTTCCA CCACCTGTTG
CCGGACTTTA CCGCCCTGGA GAACGCCGCC ATGCCATTGT TGATTGGCGG CATGAAACCG
GCGCAGGCGC AGGAAAAGGC GCTGGAAATG CTGACCGCGG TCGGGCTGGA AAAACGCAGC
AAGCACCGGC CTTCAGAGCT GTCCGGCGGT GAACGTCAGC GTGTGGCGAT AGCCCGCGCA
CTGGTCAATA ATCCGTCGTT GGTATTGGCG GATGAGCCCA CCGGCAACCT GGATAAACGC
ACCGCCGACA GCATCTTTGA TCTGCTCGGT GAACTGAACG TGCGCCAGGG CACCGCGTTC
CTGGTGGTGA CCCATGATCT GCAATTGGCC AAGCGCCTCA GTCGCCAGCT GGAAATGGCT
GACGGCCATC TGCAGGCCCA GTTGACCCTG TTGGGGGCTG AGTAA
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| Protein sequence | MSNHLLLQCD NLCKTYQEGN LHTDVLRNVS FAMQPGEMMA IVGSSGSGKS TLLHLLGGLD
SPTSGEVVYK GQSLNTLSSA AKAELRNRQL GFIYQFHHLL PDFTALENAA MPLLIGGMKP
AQAQEKALEM LTAVGLEKRS KHRPSELSGG ERQRVAIARA LVNNPSLVLA DEPTGNLDKR
TADSIFDLLG ELNVRQGTAF LVVTHDLQLA KRLSRQLEMA DGHLQAQLTL LGAE
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