Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1993 |
Symbol | |
ID | 5603186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 2180714 |
End bp | 2181523 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640937531 |
Product | putative transcriptional regulator |
Protein accession | YP_001478224 |
Protein GI | 157370235 |
COG category | [S] Function unknown |
COG ID | [COG2912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.236117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00468418 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAGCA TTGCTGATTT TGAATTTAAC ACCGCGCTGC TGAGCGCGGG CGTGATCCTG GTTTCGCAGT CCGTGCGGCG TGATTTCCCT ACCGCCGAAG TCGAACGCAA GCTGCAACAG CTGGTCGATG AAGCACGTGC GGCGATGCCA AAGGATCTCA GCCAGGAACA GCAACTGGAC GCACTCATTG AACTGTTCTT CAAAACCTGG GGTTTTGGCG GCGCCGGCGG CGTGTATCGT CTGTCCGACG CGATTTGGCT CGACAAGGTG CTGGAAGGGC GGCAGGGCAC GCCGGTTTCC CTTGGCACCA TTTTCCTGCA CATCGCTGCG CATCTGGATT TACCGCTGTT GCCGGTGATT TTCCCCACTC AACTGATCCT GCGGGCAGAC TGGCTGGATG AAGAGATGTG GCTGATCAAT CCGTTAAACG GTGAGACGCT AAACGAGCAT CAACTGGAAG TGTGGATCAA GGGCAACCTG GGTCTGGGCG CCGAGTTGGA AGACGATGAT CTCGATGAGT CAGAAAACGT CATGGTGGTG CGTAAGATGC TCGATACGCT GAAAGCCGCC CTGATGGAAG AACAACAGAT GGAAATGGCG TTGCGCGCCA GCGAAACGGT GCTGTGTTTC GATCCGGATG ACCCGTACGA AATCCGTGAC CGTGGGCTGA TTTACGCCCA GTTGGAATGC AACCATATCG CTATTTCCGA TCTCAATTAT TTTGTCGAAC AGTGTCCTGA AGATCCGGTC AGCGAAGTGA TCAAAGTACA GATCCACTCG ATTGAACCGA AACAGGTCAC GCTGCATTAA
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Protein sequence | MSSIADFEFN TALLSAGVIL VSQSVRRDFP TAEVERKLQQ LVDEARAAMP KDLSQEQQLD ALIELFFKTW GFGGAGGVYR LSDAIWLDKV LEGRQGTPVS LGTIFLHIAA HLDLPLLPVI FPTQLILRAD WLDEEMWLIN PLNGETLNEH QLEVWIKGNL GLGAELEDDD LDESENVMVV RKMLDTLKAA LMEEQQMEMA LRASETVLCF DPDDPYEIRD RGLIYAQLEC NHIAISDLNY FVEQCPEDPV SEVIKVQIHS IEPKQVTLH
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