| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1972 |
|---|
| Symbol | |
|---|
| ID | 5603417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 2157328 |
|---|
| End bp | 2158308 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640937510 |
|---|
| Product | DNA-binding transcriptional repressor EbgR |
|---|
| Protein accession | YP_001478203 |
|---|
| Protein GI | 157370214 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0103522 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACAC TGAAGGAAAT CGCAGAAGCT GCGAACGTGT CTGTTGCTAC CGTTTCGCGA
GTGCTGAATG ACGACCCCAC TCTGAGCGTG AAAGCGCAAA CCCGACAAAA AATTCTGGAA
GCCGCAGAGC GTCTCGAATA CAAGGTTCAG CCTTCAAAAC GTCACAGCGG GCATCGGCTG
ACGTTTGCCG CGTTGTTCAC CTATAAGCAG GGCATCGAGA TTAACGATCC TTACTATCTG
GCGATGCGCT ATGGCATTGA AACTCAATGT GAAAAACTGG GTATTTCGCT GGTGGCCTGT
TACGACTTTA ACGGTGAAAA AGCGCTGCCT GCGGCTGATG GCCTGCTGGT TATCGGTCGC
CCTCAGCCGG TGTTGCACGA GCAACTTGGC CAACAGAAAG TGCCGGTGGT GTTCCTTGAC
GGTGTGGTTG AAGACCCGCA GTTCGACTGC GTCAACGTTG ATTTGTATAA GATCAGCCAG
AAGGTAATCG ATTATTTCAT CGGGCGCGGT TATTCACGCA TTGGGTTTAT CGGTGGGCGT
GACGATCCGG CCTTTGCCGA TCAGCGCGAG CAGGCATTTG TCGAGTATGG CCGGTTGAAA
AACGTGGTGC AGCCCCAGGA TATTTACATC GGTGATTTCA GCAGTCAGGC GGGTTACCAG
TGCGCCAAAC GAATGCTGGA GGACACCAGC GATTATCCGC CGGCGCTGTT GGTGGCGACC
GACTCTATTG CCATCGGCGT CCTGCGTGCA CTACATGAAA AGGGCATCCA GGTCCCCGGG
CAGATTGCGT TGATCAGTGT GAACGATATT CCCACCGCCC GGTTTATTTT CCCTGCCTTA
TCAACGGTTC GCATTCCATC AGAAACCCTG GGCGCTCAGG CCGTCAACCT GTTGATGGAG
CGCATTCGCG ATGAGCGAAC CATTCCTTTA TCGATCTTTG TTCCCAGTTC GCTTCAGTTG
CGCGACACCA CGCTAGCCTG A
|
|---|
| Protein sequence | MATLKEIAEA ANVSVATVSR VLNDDPTLSV KAQTRQKILE AAERLEYKVQ PSKRHSGHRL
TFAALFTYKQ GIEINDPYYL AMRYGIETQC EKLGISLVAC YDFNGEKALP AADGLLVIGR
PQPVLHEQLG QQKVPVVFLD GVVEDPQFDC VNVDLYKISQ KVIDYFIGRG YSRIGFIGGR
DDPAFADQRE QAFVEYGRLK NVVQPQDIYI GDFSSQAGYQ CAKRMLEDTS DYPPALLVAT
DSIAIGVLRA LHEKGIQVPG QIALISVNDI PTARFIFPAL STVRIPSETL GAQAVNLLME
RIRDERTIPL SIFVPSSLQL RDTTLA
|
|---|
| |