Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1961 |
Symbol | |
ID | 5607076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 2142676 |
End bp | 2143605 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640937499 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001478192 |
Protein GI | 157370203 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0249015 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCTGA AGAAACTGAT CGTCACCTCG GTATTGATGT GCATGTTGCC GGCCAGCGTA TTGGCCAAAG ACATCAAAAT CGGCGTTTCA ATGGCTTATT TCGATGACAA TTTCCTCACC ATCCTGCGCC AGTCAATGCA GAGCAAAATG AAACAGGACG GCAACGTCAG CGGTCAATTT GAAGATGCAA AAGGGGATAT CGCCCAGCAG ATCCAACAGA TTGAGAACTT TGTCAGCCAG GGCGTCGACG CCATCATCCT CAACCCGGTC GATACCCAGG GCGTGAAGCC GATGATCAAA CTGGCGGAAA GCGCCAAGAT CCCGCTGGTG TTCGTCAACC GCCGCCCTGA GGTCACGCTG CCTGCGGGCA TGGCCTACGT AGGCTCAGAC TCCAAACTGG CCGGCAAGCT GCAGATGGAA GAGTTGGCCA AGCTGATGAA CGGCAAGGGC AACGTGATGA TCCTGATGGG CGAACTGTCC AATGAAGCGA CCCGCGACCG CACCCGTGGT GTGGAAGAAG TGGCGGCCAA GTATCCCGGC ATCAAAATCC TCGACAAGCA AACCGCCAAG TGGGGCCGTA AAGAAGCCGT CGACATTACT ACCGACTGGG CGTTGACCGG TCAGCAGATT GATGCCATCG CCTCCAACAA CGACGAAATG GCGATTGGCG CGATCCTGGC GCTGAAACAG GCGAAGAAAA GTGGCGTATT GGTGGCCGGC GTTGATGGCA CTCCGGACGC ACTGGAATAC ATCAAGAAGG GCGATCTGGC GCTGAGCGTA TTCCAGGATG CCAAAGGACA GGGTGAAGGC GCGGTGCAAA CGGCCATTCA ACTGGTGAAA GGCGAGAAGG TGGAAAGCAA CGTACTGATC CCGTATCAGC TGATCACCAA GGCCAACTAT CAAGAATTTG CCGACAAGAA CAGAAAATAA
|
Protein sequence | MKLKKLIVTS VLMCMLPASV LAKDIKIGVS MAYFDDNFLT ILRQSMQSKM KQDGNVSGQF EDAKGDIAQQ IQQIENFVSQ GVDAIILNPV DTQGVKPMIK LAESAKIPLV FVNRRPEVTL PAGMAYVGSD SKLAGKLQME ELAKLMNGKG NVMILMGELS NEATRDRTRG VEEVAAKYPG IKILDKQTAK WGRKEAVDIT TDWALTGQQI DAIASNNDEM AIGAILALKQ AKKSGVLVAG VDGTPDALEY IKKGDLALSV FQDAKGQGEG AVQTAIQLVK GEKVESNVLI PYQLITKANY QEFADKNRK
|
| |