| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1884 |
|---|
| Symbol | |
|---|
| ID | 5606301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2069981 |
|---|
| End bp | 2070901 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640937420 |
|---|
| Product | lipid A biosynthesis lauroyl acyltransferase |
|---|
| Protein accession | YP_001478115 |
|---|
| Protein GI | 157370126 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
|---|
| TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.384085 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000757192 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAG TTCCTTCTTT TAATCGCTCT TTACTGCATC CGCGTTATTG GCTCACCTGG
CTCGGCATTG GTTTGCTTTA CCTGTTGGTC TTGCTGCCTT ATCCGATTAT CTATCGCCTC
GGCACCTCGC TTGGCCGTTT TTCCATGCGA TTTCTCAAGC GCCGCGTGGC AATAGCCCAA
CGTAATCTGG TGCTGTGCTT CCCGGACATG CCGCAAGCCG AACGCGATGC GTTGGTGGTG
CAAAATTTTG AATCCGTCGG TATGGGCCTG TTTGAAACCG GTATGGCGTG GTTTTGGCCA
AACTGGCGTA TCGAACGCTG GTTCCAGGTT AGCGGGCTGG AACATATTCA GAAGGCACGA
GACAACCATC AGGGGGTTTT GCTGATCGGT CTGCACTTCC TGACGCTGGA ACTGGGTGCC
CGTATCTTTG GCATTCATAA TCCAGGCATC GGCGTTTACC GGCCGCATGA CAACAAGCTG
ATGGACTGGC TGCAGACCTG GGGCCGCATG CGTTCCAACA AATCGATGCT GGACCGTAAG
GACGTAAAAG GCATGATCCG CGCGCTAAAG CAGGGGGACA TCATCTGGTA CGCCCCGGAC
CATGACTATG GCCCACGCAG CAGCGTGTTC GCCCCACTGT TCGCCGTAGA GAAAGCCGCC
ACCACCACCG GCAGCTACGT GCTGGTGAGA ATGGGCAAGC CGGCCATTAT TCCCTTTACC
CCGCGCCGCC TGCCGGATGC CAAAGGGTAT GAGCTGATTA TGCAGCCGGC GGTGGAAAAC
TTCCCGCTGG ATAATGAGCT CGATGCCGCC GCCTTTATGA ATAAGGTGGT GGAGAAGGAA
ATCCTGATGG CGCCGGATCA GTACATGTGG CTGCACCGCC GCTTCAAAAC CCGGCCGGAA
GGCGAGCCTT CACTTTACTG A
|
|---|
| Protein sequence | MTQVPSFNRS LLHPRYWLTW LGIGLLYLLV LLPYPIIYRL GTSLGRFSMR FLKRRVAIAQ
RNLVLCFPDM PQAERDALVV QNFESVGMGL FETGMAWFWP NWRIERWFQV SGLEHIQKAR
DNHQGVLLIG LHFLTLELGA RIFGIHNPGI GVYRPHDNKL MDWLQTWGRM RSNKSMLDRK
DVKGMIRALK QGDIIWYAPD HDYGPRSSVF APLFAVEKAA TTTGSYVLVR MGKPAIIPFT
PRRLPDAKGY ELIMQPAVEN FPLDNELDAA AFMNKVVEKE ILMAPDQYMW LHRRFKTRPE
GEPSLY
|
|---|
| |