Gene Spro_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1857 
Symbol 
ID5605933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2039048 
End bp2040349 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content57% 
IMG OID640937392 
Productglycoside hydrolase family protein 
Protein accessionYP_001478088 
Protein GI157370099 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAA TCACCGTAAT CGGCGGGGGC AGCAGCTACA CGCCGGAGTT GGTCGAAGGA 
TTGATTGCGC ATTATCAGGA CGTTCCTTTA ACCGAGCTGG CACTGGTCGA TGTGGAGTCC
GGCCGTGAGA AAGTGGGCAT CATTGCCGAG CTGACCAAAA GAATGCTCAA GCGCAATGGG
CTGGAGCAGG TAGTGGTTTC GGTGCATTTC ACTCTGGAGC CGGCCATTCG CGGTGCCAGT
TTTGTGCTGA CTCAGCTGCG AGTGGGGCAA CTGGCCGCCC GTGCGGCCGA TGAGCGTCTG
GGGCTGAAAT ACCAGCGTCT GGGTCAGGAA ACCACCGGTG TCGGCGGTTT TGCCAAGGCG
TTACGCACCA TCCCGGTGAT GTTGGAGGTG GCACGCGTGG TGGAGGCGGT GGCGCCGGAT
GCCTGGATTA TCAACTTCAC TAACCCGGCG GGGATCGTTA CCGAAGCGGT TTCGCGTTAC
AGCAAGGCGA AGATTATTGG GTTGTGCAAC GTGCCGATCA CCATGCATCA CATGATCGCC
GATATGCTGA AAGCGCCACA CGATCAGGTA GACCTGCGGT TTGCCGGGCT GAACCATATG
GTGTGGGTGC ATCAGGTGAC ACAAAGCGGC AAGGATGTGA CCGCCAAAGT GCTGGAAATG
TTAAGCAATG GCGAAACGTT GTCGATGAAC AACATCAAAG ACCTGCCGTG GCCTCCGGCA
TTTCTGCAAG CGCTGGGGGC AATCCCTTGT CCGTATCACC GCTATTTTTA TCAGACCGCC
GGCATGCTGG AAGAAGAGCT GGAAGCGGCT GCCGCACAGG GGACCCGTGC CGAGCAGGTG
ATGAAGGTAG AAGCGGAGTT ATTTGCCTTA TATGCCGATC CGACGCTGGA TAAAAAACCG
GAGCAACTGA GTTTCCGCGG CGGTGCCTTC TATTCTGAGG TGGCGGTCGA ATTGATCCGT
GCCATTCACA ATAACAGCGG CAAGGTGCTG GTGGTGAATA CTCGCAATAA CGGTGCCATT
CAGGGCTTGC CCGATGATGC GGTGATTGAA ACCAACTGTG TGATCGATGC CCAGGGGGCG
CATCCGCTGA GTTTCGGCCC GCTGCCACTG GCCATGAACG GGCTGACTCA ACAGGTTAAA
GATTTTGAAC GCCTGACCAT AGAGGCGGCG GTGCATGGCG ATCGTCAGAG TGCGCTGTTG
GCGCTGGTGG TGAACCCGCT GATTGGCGGT GTCGGCATTG CGCAGCCCTT GCTCGATGAG
GTACTGAGCC TGAACCAGGC CTATCTGCCG CAGTTTAATT AA
 
Protein sequence
MTKITVIGGG SSYTPELVEG LIAHYQDVPL TELALVDVES GREKVGIIAE LTKRMLKRNG 
LEQVVVSVHF TLEPAIRGAS FVLTQLRVGQ LAARAADERL GLKYQRLGQE TTGVGGFAKA
LRTIPVMLEV ARVVEAVAPD AWIINFTNPA GIVTEAVSRY SKAKIIGLCN VPITMHHMIA
DMLKAPHDQV DLRFAGLNHM VWVHQVTQSG KDVTAKVLEM LSNGETLSMN NIKDLPWPPA
FLQALGAIPC PYHRYFYQTA GMLEEELEAA AAQGTRAEQV MKVEAELFAL YADPTLDKKP
EQLSFRGGAF YSEVAVELIR AIHNNSGKVL VVNTRNNGAI QGLPDDAVIE TNCVIDAQGA
HPLSFGPLPL AMNGLTQQVK DFERLTIEAA VHGDRQSALL ALVVNPLIGG VGIAQPLLDE
VLSLNQAYLP QFN