Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1775 |
Symbol | |
ID | 5604965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 1950906 |
End bp | 1952075 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640937308 |
Product | lipopolysaccharide heptosyltransferase III, putative |
Protein accession | YP_001478007 |
Protein GI | 157370018 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02201] lipopolysaccharide heptosyltransferase III, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0175609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.113724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAACG CTCCATACAA CACGCGCAAC ACTCCATCCC AGGCGACATT ACCTGACAGC CGTGTTCCCA ACGCGCTATT GCATCGGGAA ATCGTGCAGC GAATTTTGGT CATTAAACTG CGCCATTTCG GTGACGTGCT GTTGATGACG CCCTTACTCA GTACGCTGCG CGCTAATTAC CCCAACGCGT TGATAGATGT GCTGGTGTAT GATGGTACGG AGGCCATGCT GGCCGGCAAC CAGGATGTGT ACCTGGCCTA TACCGTGGAC CGCAACCTCA AACATCAGCG TCTCAAGGCA CAATACCGCG GTGAGCAGGC GTTGTGGAAT AGCTTGCGTA CGGGCCACTA CGACCTGGTG ATTAATCTCT CCGACCAGTG GCGGGCAGCG CTGTACTGCC GTTTTCTCAA ACCGACCTTC AGCCTGGGAT TTCGGTACCA CAAACGCAAC AACCGGCTGT GGCAGGCCTG CCATTCGTTA CTGGTTGACG TTGCCGACAC CTCGAAACAC ACCGTGCTGA ATAATCTCGA CATTCTGGTG CCGCTGGCAT TACCCACGAT AATCACCACC GTGACGCAGA CCTGGCGGCA GCGCGATGTC GATGAGATTG ATCGGCTCAG CCGACGCCAT CATCTGACGG ATTTTGTGCT GATACAGCCC ACCGCACGCT GGGCCTTCAA GACCTGGACG GTGGAAGGGT TCAGTGCCGT TATCAATCAT CTTACCGCAC AGGGCCGAAC GGTGGTGATC ACCGGCGGAC GCTCGCCGGA TGAAGCTGCA ATGATCAGCG CCATTATGGC CGGTTGCCTG TCACCACAGC GTGTGGTCAA TCTGGCCGGG CGTCTGGACC TGCCGGAGCT TGCGGTGTTG ATTGACCGGG CCAGGCTGTT TATCGGCGTA GATTCGGTTC CCATGCACAT GGCCGCCGCG TTGAAAACGC CCTCGGTAGT GCTGTTTGGG CCGAGCAACC GGGCGCAATG GGCACCCTGG CAGGCGCCGC ATACCTTGTT GTGGGCAGGC GATTATTGCT CATTGCCACC ACCGGACACC GTCGATACCG ACACACCTGA ACGCTACCTC GCGGCCATTC CGGTCAGCGA TGTTATACGG GCGGTGAGCC GGCAACTGAT CTTGTCAGCC GCGCCCGTCG TTACGTCGGC ATTCCGTTAA
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Protein sequence | MTNAPYNTRN TPSQATLPDS RVPNALLHRE IVQRILVIKL RHFGDVLLMT PLLSTLRANY PNALIDVLVY DGTEAMLAGN QDVYLAYTVD RNLKHQRLKA QYRGEQALWN SLRTGHYDLV INLSDQWRAA LYCRFLKPTF SLGFRYHKRN NRLWQACHSL LVDVADTSKH TVLNNLDILV PLALPTIITT VTQTWRQRDV DEIDRLSRRH HLTDFVLIQP TARWAFKTWT VEGFSAVINH LTAQGRTVVI TGGRSPDEAA MISAIMAGCL SPQRVVNLAG RLDLPELAVL IDRARLFIGV DSVPMHMAAA LKTPSVVLFG PSNRAQWAPW QAPHTLLWAG DYCSLPPPDT VDTDTPERYL AAIPVSDVIR AVSRQLILSA APVVTSAFR
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