Gene Spro_1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1719 
Symbol 
ID5604487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1888244 
End bp1888993 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content57% 
IMG OID640937251 
Product3-deoxy-manno-octulosonate cytidylyltransferase 
Protein accessionYP_001477951 
Protein GI157369962 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTA TCGCAATTAT TCCAGCCCGT TATGCATCAA CCCGTTTACC GGGTAAACCG 
CTGGCCGATA TCCACGGCAA GCCGATGGTG GTGCATGTTA TGGAACGTGC ACGCGAGTCG
GGCGCCAGCC GCGTTATTGT CGCGACCGAT CACCCGGCAG TAGCCGAAGC GGTCAAAGCG
GCAGGCGGTG AAGTCTGCAT GACCCGGGCC GATCACAATT CCGGCACCGA GCGCTTGGCA
GAGGTGATCG AGCATTATGG GTTCGCTGAT GACGAAATCA TCGTTAACGT TCAGGGTGAT
GAGCCACTGA TCCCACCGGT GATTGTGCGT CAGGTGGCTG AAAATCTGGC GGGCAGTCAG
GCCGGAATGG CTACCCTGGC GGTGCCTATC GAAAGCGCAG AAGAAGCTTT TAACCCCAAT
GCGGTCAAAG TGGTGATGGA TGCACAGGGT TATGCGCTCT ATTTCTCACG CGCCACCATT
CCATGGGATC GCGAACGCTT TGCCCAATCC AAAGAAAGCA TCGGCGACAG CCTGTTGCGC
CACATAGGTA TTTACGCCTA TCGCGCCGGT TTTGTTCGCC GTTACGTTAC CTGGGCGCCA
AGCCAGCTGG AGCAAATTGA GCTGCTGGAA CAGTTGCGGG TGCTGTGGTA CGGCGAAAAA
ATCCACGTGG CGGTTGCCAA GGCAATGCCG ACCGTGGGTG TCGATACGCA GGAAGATTTG
CAGCGCGTGC GCGACAGTAT CAAAGGCTGA
 
Protein sequence
MSFIAIIPAR YASTRLPGKP LADIHGKPMV VHVMERARES GASRVIVATD HPAVAEAVKA 
AGGEVCMTRA DHNSGTERLA EVIEHYGFAD DEIIVNVQGD EPLIPPVIVR QVAENLAGSQ
AGMATLAVPI ESAEEAFNPN AVKVVMDAQG YALYFSRATI PWDRERFAQS KESIGDSLLR
HIGIYAYRAG FVRRYVTWAP SQLEQIELLE QLRVLWYGEK IHVAVAKAMP TVGVDTQEDL
QRVRDSIKG