Gene Spro_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1670 
Symbol 
ID5604172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1826647 
End bp1827693 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content57% 
IMG OID640937202 
Productmacrolide transporter subunit MacA 
Protein accessionYP_001477902 
Protein GI157369913 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCT GGCACTTCAG CCACCCGGCC CCGACTCCAT TTAAAACGGT GAAGGTGGTC 
AAGGGCGATC TACAGCAAAA CGTACTGGCA ACCGGCCAGC TTGACGCGGT ACGCAAGGTT
GACGTGGGTG CGCAGGTGAG TGGGCAGTTG GAAAGCCTGT ATGTCGAGAT CGGCGATCGG
GTTAAAAAAG GCCAGTTGCT TGGGGTAATT GATCCGCAAC AGGCGCAAAA CAGCATCCGT
GAGGGTGAGG CGACGTTGCG TGAGCTGCAC GCCCAATTGC AACAGGCGCA GGCTGAGCAA
CAGCTGGCGG CGGTAACGCT GCAGCGTAAT CAGGCGTTGG CCAAACTGCA GGCGGTGTCA
CGCCAGGATC TGGATCAGGC GGCGACACAG TTGGCGGTGA AGAAGGCGCA GGTGGGTACC
ATTCAGGCGC AGATCGCCAG GAATCAGGCC AGCCTGGATA CCGCCAAGAT CAATCTGGCG
TTTACCCGTA TAGAAGCACC GATGGACGGT GACGTGGTGC AAATCACCAC GCTGCAGGGC
CAGACGGTGA TAGCCGCGCA GCAGGCACCG AACATTTTGA CGCTGGCGGA TCTCAGCACC
ATGCTGGTGA AGGCTCAGGT GTCGGAAGCG GACGTCATCA GCCTCAAGCC GGGCCAAAAA
GCCTGGTTTA CCGTGTTGGG CGATCCTAAC CGACGCTTTG ACGGCGTGCT GAAAGATATT
CAGCCAACGC CGGAAAAGGT CAATAACGCC ATCTTTTACT ATGCGCGTTT TGAAGTGCCC
AATCCCGAGG GATTATTGCG ACTGCAGATG ACGGCGCAGG TGCATATTCA ACTGGCGGGC
GTCAACCAGG TGCAGGTCAT TCCTCTGGCC GCGTTGGGCG ATCAAATCGC CGATAATCGC
TACCATGTTT CGATATTGAA ACAGGGCAAG GAGGAAAAGC GCGAGGTGGC CATTGGCCTG
CGAAATAATA TCGACGTGCA AATTCTCAGC GGGTTGAACA TTGGCGATGA AGTGATTGTC
AGCCGCGGCG GCGCGGAGGC TCTCTGA
 
Protein sequence
MAAWHFSHPA PTPFKTVKVV KGDLQQNVLA TGQLDAVRKV DVGAQVSGQL ESLYVEIGDR 
VKKGQLLGVI DPQQAQNSIR EGEATLRELH AQLQQAQAEQ QLAAVTLQRN QALAKLQAVS
RQDLDQAATQ LAVKKAQVGT IQAQIARNQA SLDTAKINLA FTRIEAPMDG DVVQITTLQG
QTVIAAQQAP NILTLADLST MLVKAQVSEA DVISLKPGQK AWFTVLGDPN RRFDGVLKDI
QPTPEKVNNA IFYYARFEVP NPEGLLRLQM TAQVHIQLAG VNQVQVIPLA ALGDQIADNR
YHVSILKQGK EEKREVAIGL RNNIDVQILS GLNIGDEVIV SRGGAEAL