Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1645 |
Symbol | |
ID | 5604063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 1801037 |
End bp | 1802146 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640937177 |
Product | putrescine transporter subunit: periplasmic-binding component of ABC superfamily |
Protein accession | YP_001477877 |
Protein GI | 157369888 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0561958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCACCC TACGTAAAAA GTGGTTATCG GGTGTGGTTG CCGGCCTGCT GATGGCAGCA AGCGTCACGG CGTCAGCCGA GGAAAAAACG CTGCACATCT ATAACTGGTC CGACTATATT GCGCCGGACA CCTTAGCCAA ATTCCAGAAA GAAACCGGCA TTAAAGTGGT GTACGACGTC TTTGACTCCA ACGAAGTGTT GGAAGGCAAA CTGATGGCGG GCAGCACCGG TTATGATCTG GTAGTTCCTT CATCCAATTT CCTTGAGCGT CAGTCGAAGG CCGGTATTTT CGAGCCGCTC GACAAGAGCA AGATGCCGAA CTACAAAAAC CTTGATCCCG AGATGCTGCA ACTGGTGGCG CACAATGACA AGGACAACAA GTACGGTATC CCTTATCTGA TGGTGACCAC CGGCATCGGC TATAACGTCG ACAAGGTGAA GGCGGTACTG GGCAAAGACG CACCGGTTGA CAGCTGGGAT CTGATCCTCA AACCGGAAAA TCTCGAGAAG TTGAAAAGCT GCGGCGTTTC CTTCCTGGAT GCGCCAAGTG AGGTCTATGC GACCGTGCTG CACTACCTGG GCAAGGATCC CAACAGCACC AACGCGGCAG ATTACACCGG TGCGGCCAAC GATCTGTTGC TCAAGCTGCG GCCGAACATC CGTTATTTCC ACTCTTCCCA GTACATCAAC GATTTGGCAA ACGGTGATAT CTGCGTAGCG ATCGGCTGGT CCGGCGACGT GATGCAGGCG GCCAATCGCG CCAAAGAAGC GAAGAACGGT GTGAACGTGG CCTATGCGAT CCCGAAAGAG GGGGCGCTCA CTTATTTTGA CATGTTCGCC ATGCCGGCGG ATGCCAAAAA CAAGGACGCT GCCTACCAGT TCCTGAACTT CCTGATGAAG CCTGATGTCA TGGCGGGGAT CAGTAACTTT GTGTATTACG CCAACGCGGT GAAGGACTCT ACACCGCTGG TCAATGCCGA AGTCCGCAAC AATCCGAACG TGTACCCACC GGCCGATCTG CGCGCCAAGC TGTTTACGCT GAACGTGCAG TCGCCGAAGC TGGATCGTGT GATTACCCGC GCCTGGACTA AAGTTAAAAG CGGACGCTAA
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Protein sequence | MVTLRKKWLS GVVAGLLMAA SVTASAEEKT LHIYNWSDYI APDTLAKFQK ETGIKVVYDV FDSNEVLEGK LMAGSTGYDL VVPSSNFLER QSKAGIFEPL DKSKMPNYKN LDPEMLQLVA HNDKDNKYGI PYLMVTTGIG YNVDKVKAVL GKDAPVDSWD LILKPENLEK LKSCGVSFLD APSEVYATVL HYLGKDPNST NAADYTGAAN DLLLKLRPNI RYFHSSQYIN DLANGDICVA IGWSGDVMQA ANRAKEAKNG VNVAYAIPKE GALTYFDMFA MPADAKNKDA AYQFLNFLMK PDVMAGISNF VYYANAVKDS TPLVNAEVRN NPNVYPPADL RAKLFTLNVQ SPKLDRVITR AWTKVKSGR
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