Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1631 |
Symbol | |
ID | 5603988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 1788688 |
End bp | 1789530 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640937163 |
Product | DNA-binding transcriptional repressor DeoR |
Protein accession | YP_001477863 |
Protein GI | 157369874 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.411017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00201461 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGGGC CGCTATTACC CCGCATTTGT GTGTTCAGCC CTGATGAAAC TTTCTTAACC CTGTGGGAAG ACAGACAGAT GGAAACGCGG CGCGAAGAAC GTCTCAATCG ATTAGTCCAG GCGTTAAAGC GCTCTGACAA GATCCACTTA AAAGAAGCCG CCGTCCTGTT GGGCGTGTCA GAAATGACCA TCCGCCGCGA TCTCAGCGCA GAACCGGCGG CCGTGGTTCT GCTGGGCGGT TACGTGGTGG CCGATCCGCG CAGTAACGGC GTGACCCACT ATTTTGTTTC CGACCAAAAA GCCAAGCAGG TCACGGAAAA ACGCCGTATC GGCCTGCTCG CCGCGCAGCT TATCAGCGAA AACGACACCG TATTTTTCGA CTGCGGCACC ACTACGCCGG CGATCATCGA CGCAATCGCT GACGACCTGG TCTTCACCGC GGTCTGCCAC TCACTCAATA CCTTCCTGGC GTTACAGGAC AAACCGAACT GCAAGGTGAT CCTGTGCGGC GGCGAATTCA AGCCGAACAA CTATATATTC ACCGCCGTCG GCCGCCACAG CGAGCTGGAT CATATCTGCC CCAATATCGC CTTTATCTCC GCCGCCGGTT TGAGCCTGCA GCATGGCGCA ACCTGCTTTA ACTTTGATGA ACTGGAGATG AAGCACCGGG CGATAACGAT GTCACAGCAA AAAATCCTGG TGGCCGACCA CAGTAAATTC GGCAAAACCA AACCCGCCTG CATCGGGCCA TTGACTCAAT TCGACCGGGT GATCACCGAT CGCCAGCCTG ACCCCGAGTT TGCGGAGTTT TTCAGCGAAA ACGCGATCGC CATTCGTTTT TAA
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Protein sequence | MAGPLLPRIC VFSPDETFLT LWEDRQMETR REERLNRLVQ ALKRSDKIHL KEAAVLLGVS EMTIRRDLSA EPAAVVLLGG YVVADPRSNG VTHYFVSDQK AKQVTEKRRI GLLAAQLISE NDTVFFDCGT TTPAIIDAIA DDLVFTAVCH SLNTFLALQD KPNCKVILCG GEFKPNNYIF TAVGRHSELD HICPNIAFIS AAGLSLQHGA TCFNFDELEM KHRAITMSQQ KILVADHSKF GKTKPACIGP LTQFDRVITD RQPDPEFAEF FSENAIAIRF
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