| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1626 |
|---|
| Symbol | |
|---|
| ID | 5603933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 1780703 |
|---|
| End bp | 1781848 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640937158 |
|---|
| Product | cystathionine gamma-synthase |
|---|
| Protein accession | YP_001477858 |
|---|
| Protein GI | 157369869 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00195748 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGT TTGATACGTT GACCGTTCAC GCCGGTTATA CCCCGGACGC TACCGGCGCA
GTGATGCCGG CCATTTATGC CACCTCCACC TATGCCCAAC CGGCACCGGG GGAACATACC
GGCTATGAAT ATTCGCGCAG CGCCAACCCA ACACGCACTG CGTTGGAGAG CGCCATCGCC
GAACTGGAAA GCGGCAGCCG CGGCTACGCT TTCGCTTCTG GTCTGGCGGC CTGCTCGACG
GTGCTGGAGC TGCTCGATCA GGGCAGCCAC CTGGTGGCGG TTGACGATCT GTACGGCGGG
ACCTATCGCC TGCTGGAAAA GGTGCGTAGC CGCACCGCCG GATTGCGGGT TACCTATGTT
TCCCCGGCGG ACATTACCGC ACTGGAGCAG GCGATCGAAC CGGATACCAA AATGATCTGG
GTGGAAACGC CGACCAATCC GCTGTTGAAG CTGGCGGACT TGAGTGCGAT CGCGGCGATC
GCCAAAAAAC ACGATTTAAT CAGCGTGGCG GACAACACCT TCGCCTCACC TTATATTCAA
CGTCCGCTGG AACTCGGCTT TGACGTGGTG GTGCATTCCG CCACCAAATA CCTCAATGGC
CATTCCGACG TGGTGGCCGG TGTGGCCGCG GTAGGGAATA ACCCGGAGTT GGCCGAACAG
CTAGGTTTCC TGCAAAACGC GGTAGGTGGC ATTCTCGATC CGTTCAGCAG CTTCCTGACG
TTGCGCGGTA TCCGCACGCT GGCGCTGCGC ATGGAGCGTC ACAGTAATAG CGCCTTGCGC
ATCGCCCAGT GGCTGGAAAG CCAACCGCAG GTGGAAGAAG TCTACTATCC GGGCCTGCCG
AGCCATCCAC AACACGCGCT GGCGGCCAAG CAGATGAGCA GTTTCGGCGG CATGATTTCG
GTGCGCCTGA AAGGTGACGA TGCCTTTGCC CGTCGGGTGA TCAAACGTTC AAAACTGTTC
ACCCTGGCAG AAAGCCTGGG CGGCGTGGAA AGCCTGATTA GCCAGCCGTT TAGCATGACT
CATGCGTCGA TCCCGCTGGA ACAGCGGCTG AAAACCGGCA TCACGCCACA GTTACTGCGT
CTGTCGGTAG GTATTGAGGA TGCGGATGAT CTGATCGCCG ATTTGCAGCA GGCGCTGGCG
GAGTAA
|
|---|
| Protein sequence | MAKFDTLTVH AGYTPDATGA VMPAIYATST YAQPAPGEHT GYEYSRSANP TRTALESAIA
ELESGSRGYA FASGLAACST VLELLDQGSH LVAVDDLYGG TYRLLEKVRS RTAGLRVTYV
SPADITALEQ AIEPDTKMIW VETPTNPLLK LADLSAIAAI AKKHDLISVA DNTFASPYIQ
RPLELGFDVV VHSATKYLNG HSDVVAGVAA VGNNPELAEQ LGFLQNAVGG ILDPFSSFLT
LRGIRTLALR MERHSNSALR IAQWLESQPQ VEEVYYPGLP SHPQHALAAK QMSSFGGMIS
VRLKGDDAFA RRVIKRSKLF TLAESLGGVE SLISQPFSMT HASIPLEQRL KTGITPQLLR
LSVGIEDADD LIADLQQALA E
|
|---|
| |