| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1598 |
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| Symbol | |
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| ID | 5603742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 1749485 |
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| End bp | 1750864 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640937130 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001477830 |
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| Protein GI | 157369841 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.538573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.487426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTCAAT TTAAACGACA GGTTGCTGGC CTTGCTATCA GTACCCTCTT GTTTGCGATA
GCTGCGCCGG TTCATTCGAT AGGGATTATA GACGCATATT CGCTGGCACT TGAAAAAGAT
CCGACCTTTA GGGCGGCTAT AAAAGAGAAA GAGGCGGGAG ACGAAAACGA AAACATCGGC
AGGGCGGGGC TGCTGCCGAA GGTATCGCTT AATTACCAGA ACTCACCGAG AAACTGGCAA
ACGCAAAAGT ACCCGGCGAG TGACATTTTT GGCAACAGTC TTGGTGAAAC CACCAAGCGG
CAGCAGTACC GCAGTTATTC CAGCTCGGTA ACGCTGACGC AACCGCTGTT CGATTACGAG
GCTTATGCAC GCTACAAGGC TGGCGTGGCG CAGACGCTGA TGTCTGATGA GCGCTACCGC
AGCAAGTTTC TTGATTTGGC CGTACGGGTG ATCTCCGCCT ATGTGGAAGT GGCTTACTCG
AAGGATCAAA TCGCTTTAGC TTCAGCTCAA AAGGCGGCCT ATAAAGAACA GTTGTCGCTG
AACGATCGTT TAATGAGCGC GGGTGAGGGC ACCATTACCG ACGTTTCCGA GACTCAGGCG
CGCTACAGCT TGGCAGAGGC GCAGGAAATT GAGGCGCGTG ATGCGCTGGA CGCGGCTCAG
CGCGAGTTGG AAGTCATTAT TGGTATGCCG CTCAATCAGC TCGATGACGT ACAGCTGCTA
CGCCCTGGCA AATTCCAGGT GGCGCCGTTA ATCCCATCAA AGTTTGAAGA GTGGCAAAAA
ATTGCCCTCG AGAATAATCC GATGTTGGCG GCCTCTCGCC ACGGGGTTGA TGCGGCGAAA
TATGAAGTGG AGAGAAATCG TGCTGGTTTT ATGCCGCAGG TGCAGCTCTA CGCCTCGCAT
TCTGAGAATG ACTCCAGCAG CGATAATACG GTTAACCAAA AATATCGCAC TGACAGTATT
GGTGTACAGG TGAGTATGCC GATCTACGCC GGCGGTGGGG TTTCGGCATC GACTCGCCAG
GCTGCATCAC GATACGGGCA GGCGATGTAC GAAATGGATG CGCAGGTGGG CACTACGCTT
AACGATCTGC GCAAACAGTA TAATTTGTGC ATTAGCAGCC GTGCCAAATT GGCGGCTTAC
GAGCTGGCGG TGAAGTCGGC GACCACTCAG GTAACGGCAA CCCGGCAAAG CGTATTGGCG
GGGCAACGTG TCAACGTCGA TGTACTTAAT GCTGAGCAAC AGTTGTACAG TGCCCAACGT
GATCTGGCCT CGGCTAAGTA CACCTACATA AAATCCTGGA TTACGTTGCT GAGTGATTCG
GGAACCCTTG ATGAAAGAGA TGTAAAACGC GTGGCGCAGT ACTTTTCCAT GAGCCGCTGA
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| Protein sequence | MIQFKRQVAG LAISTLLFAI AAPVHSIGII DAYSLALEKD PTFRAAIKEK EAGDENENIG
RAGLLPKVSL NYQNSPRNWQ TQKYPASDIF GNSLGETTKR QQYRSYSSSV TLTQPLFDYE
AYARYKAGVA QTLMSDERYR SKFLDLAVRV ISAYVEVAYS KDQIALASAQ KAAYKEQLSL
NDRLMSAGEG TITDVSETQA RYSLAEAQEI EARDALDAAQ RELEVIIGMP LNQLDDVQLL
RPGKFQVAPL IPSKFEEWQK IALENNPMLA ASRHGVDAAK YEVERNRAGF MPQVQLYASH
SENDSSSDNT VNQKYRTDSI GVQVSMPIYA GGGVSASTRQ AASRYGQAMY EMDAQVGTTL
NDLRKQYNLC ISSRAKLAAY ELAVKSATTQ VTATRQSVLA GQRVNVDVLN AEQQLYSAQR
DLASAKYTYI KSWITLLSDS GTLDERDVKR VAQYFSMSR
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