Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1568 |
Symbol | |
ID | 5602890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 1709937 |
End bp | 1710821 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640937100 |
Product | cytidine deaminase |
Protein accession | YP_001477800 |
Protein GI | 157369811 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0295] Cytidine deaminase |
TIGRFAM ID | [TIGR01355] cytidine deaminase, homodimeric |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.831759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCCGC GTTTTCAAAC CGCTTTTGGC GAACTGCCCG CCACCTTGCA ATCCGCCCTG CAGTCTTATA TTGATGCGCC TGATTTCCCG GCCATGCTCA AGGCGGAACA AGTGGACGCG ATCACGCAGC GCTGCGGGCT GGATGATGAT GCTCTGGCAT TCGCTCTGCT GCCACTGGCG GCGGCCTGCT CGTTAGCGCC AATCTCACAA TTTTATGTCG GTGCCATTGC CCGTGGGCAG AGCGGCAATC TGTATTTTGG TGCCAATATG GAATTCAGCG GCGCCCCGAT GCAACAAACC ATTCATGCGG AACAGTGTGC GGTGACCCAC GCCTGGCTGC GCGGTGAGCC CGCCCTGGCC TCCATCACCG TTAACTACAC GCCTTGCGGC CACTGCCGTC AGTTTATGAA CGAACTGAAC AGCGGCGTCA GCCTTAAAAT TCGTCTGCCC GGCCGTGAAC CGGCAACGCT TGGCGATTAC CTGCCGGACT CCTTCGGCCC GAAAGACCTG GATATCACCA CGCTGCTGAT GGACCAGGTC GATCATGGTT TCCAACTGGC GCTGACTGAC GAACTGGAAA AAGCAGCGCT GGCCGCTGCC AATCAGAGCC ACGCGCCCTA CAGCAACGCC CACAGCGGCG TCGCACTGGA GGCTGAAGAC GGCACAGTCT ACACTGGCCG TTATGCGGAA AACGCCGCCT TCAACCCAAG TCTGCCGCCC CTGCAGGCCG CGCTGATTCT GATGAATGTT TCCGGCGACG ACTGTCAAAA GGTGAAGCGC GCCGTGCTGG CTGAGCCAGA AAGTGCCATC CTCACCCAAT GGGATGCTAC CCGTGCCACG CTGGCTGCCC TGGGCTGCCA AAATGTCAGC CGCATTACTT TCTGA
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Protein sequence | MHPRFQTAFG ELPATLQSAL QSYIDAPDFP AMLKAEQVDA ITQRCGLDDD ALAFALLPLA AACSLAPISQ FYVGAIARGQ SGNLYFGANM EFSGAPMQQT IHAEQCAVTH AWLRGEPALA SITVNYTPCG HCRQFMNELN SGVSLKIRLP GREPATLGDY LPDSFGPKDL DITTLLMDQV DHGFQLALTD ELEKAALAAA NQSHAPYSNA HSGVALEAED GTVYTGRYAE NAAFNPSLPP LQAALILMNV SGDDCQKVKR AVLAEPESAI LTQWDATRAT LAALGCQNVS RITF
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