Gene Spro_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1458 
Symbol 
ID5607218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1590028 
End bp1591125 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content50% 
IMG OID640936990 
Productporin 
Protein accessionYP_001477690 
Protein GI157369701 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTA ATCTTCTGGC CGTTATTATT CCGGCACTTT TAATTGCGCA GACAGCACAG 
GCAGCAGAAA TCTATAATAA AGACGGCAAC AAACTTGATT TTTACGGCCG CGTAAAAGCA
CTGCACTATT TCTCTGACGA TGCCGGTAAT GATGGCGATA AAACCTATGT GCGTATCGGT
TTTAAAGGCG CTACTCAAAT TAACGATATG CTGACTGGTT ATGGCCAGTG GGAATATCAG
ATTTCAGCTA ACCATTCTGA ATCCGACAGC GCGAAAGACA CCAAGACTCG TCTGGGCTTC
GCCGGTCTGA AATATAAAGA TATCGGTTCA TTCGACTACG GCCGCAACTA CGGCATCATC
TATGACGTCG GCGCCTGGAC GGATATGCTG CCTGAGTTCG GTGATGATGC CTACGTCAAG
ACCGACAACT TTATGAACGG CCGGACCAAC GGCGTAGCCA CCTACCGTAA CAACGACTTC
TTCGGCCTGG TTGAAGGTCT GAAATTCGCG GTTCAGTACC AGGGCAAAAA CGAAAACGAC
GGCCGCGCCA ACAGCAAGGC GAATGGCGAC GGCTGGGGCC TGTCTTCCAG CTATGAAATC
ATCGACGGCC TGAGCGTCGG TGCTGCCTAC GCCTCTTCCA ACCGTACCGC CGGCCAAAAA
GCAGGCACCT TCGGTAAAGG CGATAAAGCG GATATCTGGG CCGGCGGCAT GAAATACGAC
AATAACGACG TTTATTTGGC AGCGACCTAC TCGCAAAGCC GTAATATCGC GCCTATTTCC
GGCACCGCGA CCATCAATAA TACTTCTACC TCCGTTAGCG GCTTTGCCAA TAAGGCGGAA
GGTCTGGAAC TGGTTGCGCA ATATCAATTC GACTTCGGTC TGCGTCCATC GCTGGGTTAT
GTTCAGCAGA AAGGCAAAGA TATTGAAGGC ATCGGCGACG CCGACCTGGT GAAATATATC
GACGTTGGCG CTTACTACTA TTTCAACAAG AACATGTCGA CCTACGTCGA TTATAAAATC
AACCAACTCG ACGGCGATAA TAAGCTGGGT CTGAAAGACG ACAACGTCAT CGCCGTCGCC
CTGACCTACC AGTTCTGA
 
Protein sequence
MKRNLLAVII PALLIAQTAQ AAEIYNKDGN KLDFYGRVKA LHYFSDDAGN DGDKTYVRIG 
FKGATQINDM LTGYGQWEYQ ISANHSESDS AKDTKTRLGF AGLKYKDIGS FDYGRNYGII
YDVGAWTDML PEFGDDAYVK TDNFMNGRTN GVATYRNNDF FGLVEGLKFA VQYQGKNEND
GRANSKANGD GWGLSSSYEI IDGLSVGAAY ASSNRTAGQK AGTFGKGDKA DIWAGGMKYD
NNDVYLAATY SQSRNIAPIS GTATINNTST SVSGFANKAE GLELVAQYQF DFGLRPSLGY
VQQKGKDIEG IGDADLVKYI DVGAYYYFNK NMSTYVDYKI NQLDGDNKLG LKDDNVIAVA
LTYQF