Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1458 |
Symbol | |
ID | 5607218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 1590028 |
End bp | 1591125 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640936990 |
Product | porin |
Protein accession | YP_001477690 |
Protein GI | 157369701 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTA ATCTTCTGGC CGTTATTATT CCGGCACTTT TAATTGCGCA GACAGCACAG GCAGCAGAAA TCTATAATAA AGACGGCAAC AAACTTGATT TTTACGGCCG CGTAAAAGCA CTGCACTATT TCTCTGACGA TGCCGGTAAT GATGGCGATA AAACCTATGT GCGTATCGGT TTTAAAGGCG CTACTCAAAT TAACGATATG CTGACTGGTT ATGGCCAGTG GGAATATCAG ATTTCAGCTA ACCATTCTGA ATCCGACAGC GCGAAAGACA CCAAGACTCG TCTGGGCTTC GCCGGTCTGA AATATAAAGA TATCGGTTCA TTCGACTACG GCCGCAACTA CGGCATCATC TATGACGTCG GCGCCTGGAC GGATATGCTG CCTGAGTTCG GTGATGATGC CTACGTCAAG ACCGACAACT TTATGAACGG CCGGACCAAC GGCGTAGCCA CCTACCGTAA CAACGACTTC TTCGGCCTGG TTGAAGGTCT GAAATTCGCG GTTCAGTACC AGGGCAAAAA CGAAAACGAC GGCCGCGCCA ACAGCAAGGC GAATGGCGAC GGCTGGGGCC TGTCTTCCAG CTATGAAATC ATCGACGGCC TGAGCGTCGG TGCTGCCTAC GCCTCTTCCA ACCGTACCGC CGGCCAAAAA GCAGGCACCT TCGGTAAAGG CGATAAAGCG GATATCTGGG CCGGCGGCAT GAAATACGAC AATAACGACG TTTATTTGGC AGCGACCTAC TCGCAAAGCC GTAATATCGC GCCTATTTCC GGCACCGCGA CCATCAATAA TACTTCTACC TCCGTTAGCG GCTTTGCCAA TAAGGCGGAA GGTCTGGAAC TGGTTGCGCA ATATCAATTC GACTTCGGTC TGCGTCCATC GCTGGGTTAT GTTCAGCAGA AAGGCAAAGA TATTGAAGGC ATCGGCGACG CCGACCTGGT GAAATATATC GACGTTGGCG CTTACTACTA TTTCAACAAG AACATGTCGA CCTACGTCGA TTATAAAATC AACCAACTCG ACGGCGATAA TAAGCTGGGT CTGAAAGACG ACAACGTCAT CGCCGTCGCC CTGACCTACC AGTTCTGA
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Protein sequence | MKRNLLAVII PALLIAQTAQ AAEIYNKDGN KLDFYGRVKA LHYFSDDAGN DGDKTYVRIG FKGATQINDM LTGYGQWEYQ ISANHSESDS AKDTKTRLGF AGLKYKDIGS FDYGRNYGII YDVGAWTDML PEFGDDAYVK TDNFMNGRTN GVATYRNNDF FGLVEGLKFA VQYQGKNEND GRANSKANGD GWGLSSSYEI IDGLSVGAAY ASSNRTAGQK AGTFGKGDKA DIWAGGMKYD NNDVYLAATY SQSRNIAPIS GTATINNTST SVSGFANKAE GLELVAQYQF DFGLRPSLGY VQQKGKDIEG IGDADLVKYI DVGAYYYFNK NMSTYVDYKI NQLDGDNKLG LKDDNVIAVA LTYQF
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