Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1404 |
Symbol | |
ID | 5606297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 1530023 |
End bp | 1530769 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640936936 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001477636 |
Protein GI | 157369647 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCAAC GTACAGCGAT TGTTACCGGC GGTTCCAGCG GTATCGGGCT GGCCATCGCT CAACAACTGG CGCAACAGGA TTACCGCATC GCCATCGTGG CGCGCGACCC GCAACGCCTG CAGCAGGCGG CGCAGCAAAT TGGCCCCGCT ACCCGCTACT ATTCGGCGGA CCTGAGCCGC CGTGGGCCAG TGGAAGACGT CGTCGCCCAG TTGGCAGCCG ATCTCGGCAC GGTGGATGTC CTGATTAACA ACGCCGGATT TACCCGGGTG ATTGCCGCCG ATACGCCGTT GGCGCAGGCC GAACAAGAAT GGGACGCGGT GATCGAAGGG AACCTGAAAA GTACCTTCCT GTTTACCCTG GCGATGTTGC CACACCTGAG CAAACCGGGC GGCCGCATCA TTAATCTGAG CTCAATTGCC GCCCAATGCG GCAGCGGCAG CGCGGGTGCA TTAGGTTATT CCGCCGCCAA AGCCGGGGTG CAGGGTTTTA CCCTCAGTCT GGCACGCGAA CTTGGCGAGT TGGGGATTAC CGTCAACGCC ATTGCGCCGG GGTTTATCGC CGATACTCGC TTCTTCGGCG CCGGGCTACC GCAGGATCGC ATTGACGCCA TTGCCGCTGA AACACCGATG GGCCGCACCG GCCGGGTGGA AGACATCGCC AGCGCCGCAC TGTGGCTGGC GTCAAAAGAA GCCTCGTTCG TCACCGGAAC CATCACCTCG ATTAACGGCG GTGCGCGGGT CGGTTAA
|
Protein sequence | MTQRTAIVTG GSSGIGLAIA QQLAQQDYRI AIVARDPQRL QQAAQQIGPA TRYYSADLSR RGPVEDVVAQ LAADLGTVDV LINNAGFTRV IAADTPLAQA EQEWDAVIEG NLKSTFLFTL AMLPHLSKPG GRIINLSSIA AQCGSGSAGA LGYSAAKAGV QGFTLSLARE LGELGITVNA IAPGFIADTR FFGAGLPQDR IDAIAAETPM GRTGRVEDIA SAALWLASKE ASFVTGTITS INGGARVG
|
| |