| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1270 |
|---|
| Symbol | |
|---|
| ID | 5604630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 1397788 |
|---|
| End bp | 1398660 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640936797 |
|---|
| Product | succinyl-CoA synthetase, alpha subunit |
|---|
| Protein accession | YP_001477502 |
|---|
| Protein GI | 157369513 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.531627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00241286 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATTT TAATCGATAA AAACACCAAA GTAATTTGCC AGGGCTTCAC CGGTAGCCAG
GGGACTTTCC ACTCCGAGCA AGCTATCGCT TACGGAACCA AAATGGTCGG TGGCGTAACG
CCGGGCAAAG GCGGCACCGA GCATCTGGGC CTGCCGGTGT TCAACACCGT GCGTGAAGCC
GTAGAAGCGA CCGGCGCTAC CGCGTCCGTT ATCTATGTAC CGGCTCCGTT CTGCAAAGAC
TCCATTCTGG AAGCAATCGA TGCAGGCATC AAACTGATCA TCACCATCAC CGAAGGCATC
CCGACGCTGG ATATGCTGAC CGTGAAAGTG AAGCTGGATG AAGCCGGCGT GCGCATGATT
GGCCCGAACT GCCCAGGTGT TATCACCCCG GGCGAGTGCA AAATCGGCAT CATGCCTGGC
CACATCCACC TGCCGGGTAA AGTGGGTATC GTTTCCCGCT CTGGCACCCT GACCTACGAA
GCGGTAAAAC AAACTACCGA TACCGGTCTG GGCCAGTCTA CCTGTGTGGG TATCGGCGGT
GACCCGATCC CAGGCTCCAA CTTCATCGAT ATCCTGAAAC TGTTCCAGGA AGATCCGCAG
ACTGAAGCGA TCGTCATGAT CGGTGAGATC GGCGGTAGCG CTGAAGAAGA AGCGGCAGCC
TATATCAAAG AGCACGTGAC CAAGCCAGTG GTTGGCTATA TCGCGGGTGT TACCGCGCCT
AAAGGCAAAC GTATGGGCCA TGCCGGCGCC ATCATTGCCG GCGGCAAAGG GACTGCAGAC
GAGAAGTTTG CGGCGCTGGA AGCGGCAGGG GTTAAAACCG TGCGCAGCCT GGCTGACATC
GGCGAAGCAG TCAAAGCGGT TCTGAACCGC TAA
|
|---|
| Protein sequence | MSILIDKNTK VICQGFTGSQ GTFHSEQAIA YGTKMVGGVT PGKGGTEHLG LPVFNTVREA
VEATGATASV IYVPAPFCKD SILEAIDAGI KLIITITEGI PTLDMLTVKV KLDEAGVRMI
GPNCPGVITP GECKIGIMPG HIHLPGKVGI VSRSGTLTYE AVKQTTDTGL GQSTCVGIGG
DPIPGSNFID ILKLFQEDPQ TEAIVMIGEI GGSAEEEAAA YIKEHVTKPV VGYIAGVTAP
KGKRMGHAGA IIAGGKGTAD EKFAALEAAG VKTVRSLADI GEAVKAVLNR
|
|---|
| |