| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1268 |
|---|
| Symbol | |
|---|
| ID | 5604628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 1395290 |
|---|
| End bp | 1396504 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640936795 |
|---|
| Product | dihydrolipoamide succinyltransferase |
|---|
| Protein accession | YP_001477500 |
|---|
| Protein GI | 157369511 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.898842 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0702879 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCG TAGATATTCT GGTTCCTGAC CTTCCTGAAT CGGTTGCCGA TGCGACCGTC
GCCACCTGGC ACAAGAAACC AGGTGACAGC GTCCAGCGTG ACGAAGTTCT GGTTGAAATC
GAAACTGACA AAGTGGTGCT GGAAGTTCCG GCCAGCGAAG CAGGCATTCT GGATGCGATC
GTGGAAGAAG AGGGCGCAAC CGTGCTTTCT CGCCAGATCC TTGGCCGTAT TCGTCCGGGC
GACAGCTCTG GCAAGCCGAC CGAAGAAAAA AGCCAGGCTA AAGAAGCCAC TCCAGCCCAG
CGCGCAACCG CCAGCCTGGA AGAAGAGAGC AACGACGCAC TCAGCCCGGC TATCCGCCGC
CTGATTGCCG AGCATGACCT CGATGCAGCT GCCATCAAAG GCAGCGGCGT GGGTGGCCGT
ATCACCCGCG AAGACGTGGA AGCGCACCTG GCCAACGGCA AGAAAGCCGA CAAGCCGGCC
GCCGTTGAAG CCGCTCCGCA GCCTGCTCTG AGCGGTCGCA GCGAGAAGCG TGTTCCTATG
ACCCGTCTGC GCAAGCGCGT GGCCGAGCGC CTGTTGGAAG CGAAGAACAG CACTGCGATG
CTGACGACCT TCAACGAAAT CAACATGCAG CCGATCATGG ACATGCGCAA GCAGTACGGT
GAAGCCTTCG AAAAACGCCA CGGTGTACGT CTGGGCTTCA TGTCCTTCTA CATCAAGGCG
GTAGTTGAAG CGCTGAAACG CTTCCCGGAA GTGAACGCTT CTATCGACGG CACCGACGTG
GTGTACCACA ACTATTTCGA TATCAGCATT GCGGTATCTA CTCCTCGTGG CCTGGTGACC
CCGGTGCTGC GCGATGTAGA CAGCATGAGC ATGGCGGACA TCGAGAAGAA AATCAAAGAG
CTGGCAGTCA AAGGCCGTGA TGGCAAATTG ACTGTGGAAG AGCTGACCGG CGGTAACTTC
ACCATTACCA ACGGCGGCGT ATTCGGTTCA CTGATGTCTA CCCCGATCAT CAACCCACCG
CAGAGCGCCA TCCTGGGCAT GCACGCCATT AAAGATCGCC CAATGGCGGT CAAAGGCCAG
GTTGTGATCC TGCCGATGAT GTATCTGGCA CTGTCTTATG ACCATCGCCT GATCGACGGT
AAAGAATCCG TGGGTTACCT GGTGACGGTT AAAGAGATGC TGGAAGATCC GGCTCGTCTG
CTGCTGGACG TATAA
|
|---|
| Protein sequence | MSSVDILVPD LPESVADATV ATWHKKPGDS VQRDEVLVEI ETDKVVLEVP ASEAGILDAI
VEEEGATVLS RQILGRIRPG DSSGKPTEEK SQAKEATPAQ RATASLEEES NDALSPAIRR
LIAEHDLDAA AIKGSGVGGR ITREDVEAHL ANGKKADKPA AVEAAPQPAL SGRSEKRVPM
TRLRKRVAER LLEAKNSTAM LTTFNEINMQ PIMDMRKQYG EAFEKRHGVR LGFMSFYIKA
VVEALKRFPE VNASIDGTDV VYHNYFDISI AVSTPRGLVT PVLRDVDSMS MADIEKKIKE
LAVKGRDGKL TVEELTGGNF TITNGGVFGS LMSTPIINPP QSAILGMHAI KDRPMAVKGQ
VVILPMMYLA LSYDHRLIDG KESVGYLVTV KEMLEDPARL LLDV
|
|---|
| |